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EBI
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PDBsum
Ligand clusters for UniProt code P01900
Ligand clusters for P01900: H-2 class I histocompatibility antigen, D-D alpha chain OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=1
Top 6 (of 15) ligand clusters
Cluster 1.
11 ligand types
21 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1biiA
Structures
PDB
Schematic diagram
1bii
A
3e6h
A
5wes
A
5wet
A
5kd4
A
more ...
Cluster 1 contains 11 ligand types
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Ligand
Description
1. Ligand:
ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE × 7
PDB codes:
1bii
(A),
1ddh
(A),
1qo3
(A),
3dmm
(A),
3ecb
(A),
5ivx
(A),
6npr
(A).
2. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
1qo3
(A),
3ecb
(A),
5ivx
(A),
5weu
(A).
3. Ligand:
GLY-LEU × 2
PDB codes:
5wes
(A),
5wet
(A).
4. Ligand:
ARG-GLY-PRO-GLY-CYS × 1
PDB code:
5wes
(A).
5. Ligand:
ARG-GLY-PRO-GLY-CYS-ALA × 1
PDB code:
5wet
(A).
6. Ligand:
ARG-GLY-PRO-GLY-CYS-ALA-PHE-VAL-THR-ILE × 1
PDB code:
5weu
(A).
7. Ligand:
ILE-GLY-PRO-GLY-ARG-ALA-PHE-TYR-ALA × 1
PDB code:
3e6f
(A).
8. Ligand:
ILE-GLY-PRO-GLY-ARG-ALA-PHE-TYR-THR × 1
PDB code:
5t7g
(A).
9. Ligand:
ILE-GLY-PRO-GLY-ARG-ALA-PHE-TYR-THR-ILE × 1
PDB code:
3e6h
(A).
10. Ligand:
ILE-GLY-PRO-GLY-ARG-ALA-PHE-TYR-VAL × 1
PDB code:
5kd7
(A).
11. Ligand:
ILE-GLY-PRO-GLY-ARG-ALA-PHE-TYR-VAL-ILE × 1
PDB code:
5kd4
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1qo3
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 6
1,2-Ethanediol
PDB codes:
1qo3
(A),
3ecb
(A),
5kd7
(A),
5t7g
(A),
5weu
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3ecb
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
3ecb
(A),
5ivx
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5ivx
(A).