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EBI Databases Structure Databases PDBsum

Ligand clusters for UniProt code P00974

Ligand clusters for P00974: Pancreatic trypsin inhibitor OS=Bos taurus OX=9913 PE=1 SV=2

Top 6 (of 16) ligand clusters
Cluster 1.
2 ligand types
36 ligands
 Cluster 2.
2 ligand types
47 ligands
 Cluster 3.
2 ligand types
73 ligands
 Cluster 4.
2 ligand types
114 ligands
 Cluster 5.
1 ligand type
1 ligand
 Cluster 6.
1 ligand type
3 ligands
Representative protein: 1t8lB  
JSmol
 

Structures

PDB   Schematic diagram
1t8lB    
1bpiA    
1nagA    
5ptiA    
7ptiA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 1p2q(B).


 
2. Ligand: SO4 × 35
Sulfate ion
PDB codes: 1ejm(B), 1fy8(I), 1p2j(I), 2fi3(I), 2fi4(I), 2fi5(I), 2ftl(I), 2ftm(B), 2ra3(I), 2zjx(A), 3btd(I), 3bte(I), 3btf(I), 3btg(I), 3bth(I), 3btk(I), 3btm(I), 3btq(I), 3btt(I), 3btw(I), 3fp6(I), 3fp7(J), 3fp8(I), 3ldi(A), 3otj(I), 3tgk(I), 4wwy(C), 4y0y(I), 4y0z(I), 4y10(I), 4y11(I), 5jb6(A), 5xx3(A), 5xx4(A), 6f1f(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6f1f(A).


 
2. Ligand: SO4 × 46
Sulfate ion
PDB codes: 1g6x(A), 1p2m(B), 1p2n(B), 1p2o(B), 1p2q(B), 1qlq(A), 1t7c(B), 1t8l(B), 1t8m(B), 1t8n(B), 1t8o(B), 2fi3(I), 2fi4(I), 2fi5(I), 2ftl(I), 2ftm(B), 2ra3(I), 2tgp(I), 2zjx(A), 2zvx(A), 3btd(I), 3bte(I), 3btf(I), 3btg(I), 3bth(I), 3btk(I), 3btm(I), 3btq(I), 3btt(I), 3btw(I), 3fp7(J), 3ldi(A), 3otj(I), 3tpi(I), 4tpi(I), 4y0y(I), 4y11(I), 5xx2(A), 5xx3(A), 5xx4(A), 6f1f(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 66
Sulfate ion
PDB codes: 1d0d(B), 1ejm(B), 1f7z(I), 1fy8(I), 1g6x(A), 1k6u(A), 1mtn(D), 1p2i(I), 1p2j(I), 1p2k(I), 1p2m(B), 1p2n(B), 1p2o(B), 1p2q(B), 1qlq(A), 1t7c(B), 1t8l(B), 1t8m(B), 1t8n(B), 1t8o(B), 1ykt(B), 1ylc(B), 1yld(B), 2fi3(I), 2fi4(I), 2fi5(I), 2ftl(I), 2r9p(I), 2ra3(I), 2zjx(A), 2zvx(A), 3btd(I), 3bte(I), 3btf(I), 3btg(I), 3bth(I), 3btk(I), 3btm(I), 3btq(I), 3btt(I), 3btw(I), 3fp6(I), 3fp7(J), 3fp8(I), 3otj(I), 3tgi(I), 3tgj(I), 3tgk(I), 4dg4(E), 4wwy(C), 4wxv(C), 4y0y(I), 4y0z(I), 4y10(I), 4y11(I), 5jb4(A), 5jb5(A), 5jb6(A), 5jb7(A), 5xx2(A), 5xx3(A), 5xx4(A), 5xx5(A), 5xx6(A), 5xx7(A), 5xx8(A).


 
2. Ligand: PO4 × 7
Phosphate ion
PDB codes: 1bpi(A), 1bpt(A), 1nag(A), 5pti(A), 6pti(A), 7pti(A), 9pti(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 100
Sulfate ion
PDB codes: 1d0d(B), 1ejm(B), 1f7z(I), 1fy8(I), 1g6x(A), 1k6u(A), 1mtn(D), 1p2i(I), 1p2j(I), 1p2k(I), 1p2m(B), 1p2n(B), 1p2o(B), 1p2q(B), 1qlq(A), 1t7c(B), 1t8l(B), 1t8m(B), 1t8n(B), 1t8o(B), 1ykt(B), 1ylc(B), 1yld(B), 2fi3(I), 2fi4(I), 2fi5(I), 2ftl(I), 2ftm(B), 2hex(A), 2ra3(I), 2tgp(I), 2zjx(A), 2zvx(A), 3btd(I), 3bte(I), 3btf(I), 3btg(I), 3bth(I), 3btk(I), 3btm(I), 3btq(I), 3btt(I), 3btw(I), 3fp6(I), 3fp7(I), 3fp8(I), 3ldi(A), 3otj(I), 3tgi(I), 3tgj(I), 3tgk(I), 3tpi(I), 4bnr(I), 4dg4(E), 4tpi(I), 4wwy(C), 4wxv(C), 4y0y(I), 4y0z(I), 4y10(I), 4y11(I), 5jb6(A), 5jb7(A), 5xx2(A), 5xx3(A), 5xx4(A), 5xx5(A), 5xx6(A), 5xx7(A), 6f1f(A),


 
2. Ligand: EDO × 14
1,2-Ethanediol
PDB codes: 1g6x(A), 1k6u(A), 2fi3(I), 2fi4(I), 2ftm(B), 3fp6(I), 3fp7(I), 3fp8(I).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4y11(I).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1bz5(A), 2hex(A), 6f1f(A).

 

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