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Ligand clusters for UniProt code P00777

Ligand clusters for P00777: Streptogrisin-B OS=Streptomyces griseus GN=sprB PE=1 SV=2

Top 6 (of 14) ligand clusters
Cluster 1.
6 ligand types
7 ligands
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
3 ligand types
15 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1sgdE  
JSmol
 

Structures

PDB   Schematic diagram
1sgdE    
2sgpE    
1sgrE    
2sgfE    
3sgqE    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: TYR × 1
l-tyrosine
PDB code: 2qaa(A).

__K
 
2. Metal: __K × 2
PDB codes: 2sgd(E), 2sge(E).


 
3. Ligand: ASP-ALA-ILE-TYR × 1
PDB code: 2qa9(E).


 
4. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2qa9(E).


 
5. Ligand: GOL × 1
Glycerol
PDB code: 2qaa(A).


 
6. Ligand: LEU × 1
PDB code: 2qaa(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 2qa9(E), 2qaa(A), 4sgb(E).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2qaa(A).


 
3. Ligand: GOL × 1
Glycerol
PDB code: 2qa9(E).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 2qaa(A).

 

 Cluster 4 contains 3 ligand types

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Ligand Description


 
1. Ligand: PO4 × 13
Phosphate ion
PDB codes: 1sgd(E), 1sge(E), 1sgn(E), 1sgp(E), 1sgq(E), 1sgr(E), 1sgy(E), 2sgd(E), 2sge(E), 2sgf(E), 2sgp(E), 2sgq(E), 3sgq(E).


 
2. Ligand: ACY × 1
Acetic acid
PDB code: 2qaa(A).

_Cl
 
3. Metal: _CL × 1
PDB code: 2qaa(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 2qaa(A).

_Cl
 
2. Metal: _CL × 1
PDB code: 2qa9(E).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 2qaa(A).

 

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