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Ligand clusters for UniProt code P00429

Ligand clusters for P00429: Cytochrome c oxidase subunit 6B1 from Bos taurus

5 ligand clusters
Cluster 1.
3 ligand types
41 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
1 ligand type
12 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1v55H  
JSmol
 

Structures

PDB   Schematic diagram
1v55H    
6nmpH    
2dysH    
6nknH    
3ag1H    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: PGV × 39
(1r)-2-{[{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-
[(Palmitoyloxy)methyl]ethyl (11e)- Octadec-11-Enoate
PDB codes: 1v55(H), 2dyr(H), 2dys(H), 2eij(H), 2eik(H), 2eil(H), 2eim(H), 2ein(H), 2zxw(H), 3abk(H), 3abl(H), 3abm(H), 3ag1(H), 3asn(H), 3aso(H), 3wg7(H), 3x2q(H), 5b1a(H), 5b1b(H), 5b3s(H), 5iy5(H), 5w97(H), 5wau(H), 5x19(H), 5x1b(H), 5x1f(H), 5xdq(H), 5xdx(H), 5z84(H), 5z85(H), 5z86(H), 5zco(H), 5zcp(H), 5zcq(H), 6j8m(H), 6juw(H), 6nkn(H), 6nmf(H), 6nmp(H).


 
2. Ligand: DMU × 1
Decyl-Beta-D-Maltopyranoside
PDB code: 7coh(H).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6juw(H).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 5z84(H), 5z85(H), 5z86(H), 5zcq(H).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 6juw(H).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 12
1,2-Ethanediol
PDB codes: 5b3s(H), 5x19(H), 5xdq(H), 5xdx(H), 5z84(H), 5z85(H), 5z86(H), 6juw(H),

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5z84(H).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6juw(H).

 

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