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Ligand clusters for UniProt code P00429
Ligand clusters for P00429: Cytochrome c oxidase subunit 6B1 from Bos taurus
5 ligand clusters
Cluster 1.
3 ligand types
41 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
1 ligand type
12 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1v55H
Structures
PDB
Schematic diagram
1v55
H
6nmp
H
2dys
H
6nkn
H
3ag1
H
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
PGV × 39
(1r)-2-{[{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-
[(Palmitoyloxy)methyl]ethyl (11e)- Octadec-11-Enoate
PDB codes:
1v55
(H),
2dyr
(H),
2dys
(H),
2eij
(H),
2eik
(H),
2eil
(H),
2eim
(H),
2ein
(H),
2zxw
(H),
3abk
(H),
3abl
(H),
3abm
(H),
3ag1
(H),
3asn
(H),
3aso
(H),
3wg7
(H),
3x2q
(H),
5b1a
(H),
5b1b
(H),
5b3s
(H),
5iy5
(H),
5w97
(H),
5wau
(H),
5x19
(H),
5x1b
(H),
5x1f
(H),
5xdq
(H),
5xdx
(H),
5z84
(H),
5z85
(H),
5z86
(H),
5zco
(H),
5zcp
(H),
5zcq
(H),
6j8m
(H),
6juw
(H),
6nkn
(H),
6nmf
(H),
6nmp
(H).
2. Ligand:
DMU × 1
Decyl-Beta-D-Maltopyranoside
PDB code:
7coh
(H).
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6juw
(H).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
5z84
(H),
5z85
(H),
5z86
(H),
5zcq
(H).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6juw
(H).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 12
1,2-Ethanediol
PDB codes:
5b3s
(H),
5x19
(H),
5xdq
(H),
5xdx
(H),
5z84
(H),
5z85
(H),
5z86
(H),
6juw
(H),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5z84
(H).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6juw
(H).