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EBI
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PDBsum
Ligand clusters for UniProt code P00426
Ligand clusters for P00426: Cytochrome c oxidase subunit 5A, mitochondrial from Bos taurus
Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
44 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
11 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
9 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1v54E
Structures
PDB
Schematic diagram
1v54
E
2eij
E
2dys
E
1v55
E
3ag4
E
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
PSC × 43
(7r,17e,20e)-4-Hydroxy-N,N,N-Trimethyl-9-Oxo-7- [(Palmitoyloxy)methyl]-3,5,8-Trioxa-4-
Phosphahexacosa- 17,20-Dien-1-Aminium 4-Oxide
PDB codes:
1v54
(E),
1v55
(E),
2dyr
(E),
2dys
(E),
2eij
(E),
2eik
(E),
2eil
(E),
2eim
(E),
2ein
(E),
2zxw
(E),
3abk
(E),
3abl
(E),
3abm
(E),
3ag1
(E),
3ag2
(E),
3ag3
(E),
3ag4
(E),
3asn
(E),
3aso
(E),
3wg7
(E),
3x2q
(E),
5b1a
(E),
5b1b
(E),
5b3s
(E),
5iy5
(E),
5w97
(E),
5wau
(E),
5x19
(E),
5x1b
(E),
5x1f
(E),
5xdq
(E),
5xdx
(E),
5z84
(E),
5z85
(E),
5z86
(E),
5zco
(E),
5zcp
(E),
5zcq
(E),
6j8m
(E),
6juw
(E),
6nkn
(E),
6nmf
(E),
6nmp
(E).
2. Ligand:
DMU × 1
Decyl-Beta-D-Maltopyranoside
PDB code:
7coh
(E).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5b3s
(E).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 11
1,2-Ethanediol
PDB codes:
5b3s
(E),
5xdq
(E),
5xdx
(E),
5z84
(E),
5z85
(E),
5z86
(E),
5zco
(E),
5zcp
(E),
5zcq
(E),
6juw
(E),
7coh
(E).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5b3s
(E).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 9
1,2-Ethanediol
PDB codes:
5b3s
(E),
5z84
(E),
5z85
(E),
5z86
(E),
5zco
(E),
5zcp
(E),
5zcq
(E),
6juw
(E),
7coh
(E).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5iy5
(E).