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EBI
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PDBsum
Ligand clusters for UniProt code O43521
Ligand clusters for O43521: Bcl-2-like protein 11 from Homo sapiens
Top 6 (of 11) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
3 ligand types
5 ligands
Representative protein: 5vwzB
Structures
PDB
Schematic diagram
5vwz
B
3io9
B
5vwv
B
5vx3
D
3kj2
B
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2yq6
(B).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5vwv
(B).
3. Ligand:
IMD × 1
Imidazole
PDB code:
5vww
(C).
4. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5vwy
(B).
5. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2vm6
(B).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
5vww
(C).
2. Ligand:
TFA × 1
Trifluoroacetic acid
PDB code:
5vwv
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
4b4s
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
1PG × 1
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB code:
5vwz
(B).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
3kj0
(B).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5vx3
(H).
Cluster 6 contains 3 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
2nl9
(B),
3io9
(B),
3kj1
(B).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5vwv
(B).
_Cl
3. Metal:
_CL × 1
PDB code:
4yj4
(B).