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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code O31671
Ligand clusters for O31671: Sporulation kinase D OS=Bacillus subtilis (strain 168) GN=kinD PE=1 SV=1
5 ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 4jgoA
Structures
PDB
Schematic diagram
4jgo
A
4jgp
A
4jgr
A
4jgq
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACY × 2
acetic acid
Acetic acid
PDB codes:
4jgq
(A),
4jgr
(A).
2. Ligand:
PYR × 2
pyruvic acid
Pyruvic acid
PDB codes:
4jgo
(A),
4jgp
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4jgo
(A),
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4jgo
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4jgo
(A),
4jgr
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4jgo
(A).