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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code O26745
Ligand clusters for O26745: Putative snRNP Sm-like protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_649 PE=1 SV=1
3 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
2 ligand types
3 ligands
Representative protein: 1jbmA
Structures
PDB
Schematic diagram
1jbm
A
1loj
K
1loj
A
1jbm
B
1jri
C
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
URI × 3
Uridine
PDB codes:
1loj
(A),
2. Ligand:
__U × 2
PDB codes:
1loj
(K),
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1jbm
(B).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
1loj
(A),
2. Ligand:
ACY × 1
Acetic acid
PDB code:
1jbm
(A).
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1jri
(C).
Cluster 3 contains 2 ligand types
Selection shortcuts:
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
1loj
(A),
2. Ligand:
ACY × 1
Acetic acid
PDB code:
1jbm
(B).