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Ligand clusters for UniProt code O26745

Ligand clusters for O26745: Putative snRNP Sm-like protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_649 PE=1 SV=1

3 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
2 ligand types
3 ligands
Representative protein: 1jbmA  
JSmol
 

Structures

PDB   Schematic diagram
1jbmA    
1lojK    
1lojA    
1jbmB    
1jriC    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: URI × 3
Uridine
PDB codes: 1loj(A),


 
2. Ligand: __U × 2
PDB codes: 1loj(K),


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1jbm(B).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 1loj(A),


 
2. Ligand: ACY × 1
Acetic acid
PDB code: 1jbm(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1jri(C).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 1loj(A),


 
2. Ligand: ACY × 1
Acetic acid
PDB code: 1jbm(B).

 

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