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Ligand clusters for UniProt code C0JPK1

Ligand clusters for C0JPK1: VP1 (Fragment) OS=Merkel cell polyomavirus GN=VP1 PE=1 SV=1

4 ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
2 ligand types
9 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Representative protein: 4fmjB  
JSmol
 

Structures

PDB   Schematic diagram
4fmjB    
4fmiA    
4fmhA    
4fmgA    
4fmjA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: SIA-NAG-GAL × 1
SIA=O-Sialic acid, NAG=N-Acetyl-D-Glucosamine, GAL=Beta-D-Galactose.
PDB code: 4fmi(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description

_Cl
 
1. Metal: _CL × 5
PDB codes: 4fmg(A), 4fmh(A), 4fmi(A), 4fmj(A),


 
2. Ligand: GOL × 4
Glycerol
PDB codes: 4fmg(A), 4fmh(A), 4fmi(A), 4fmj(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 4fmg(A), 4fmh(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 4fmg(A), 4fmh(A).

 

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