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PDBsum entry 4fmi

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protein ligands metals Protein-protein interface(s) links
Viral protein PDB id
4fmi

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
(+ 14 more) 270 a.a.
Ligands
NAG-GAL-SIA
GAL-SIA
GOL ×25
SIA ×2
Metals
_CL ×21
Waters ×3677
PDB id:
4fmi
Name: Viral protein
Title: Merkel cell polyomavirus vp1 in complex with 3'-sialyllactosamine
Structure: Vp1. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t. Fragment: unp residues 37-319. Engineered: yes
Source: Merkel cell polyomavirus. Organism_taxid: 493803. Strain: w162. Gene: vp1. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.00Å     R-factor:   0.196     R-free:   0.236
Authors: U.Neu,H.Hengel,T.Stehle
Key ref: U.Neu et al. (2012). Structures of Merkel cell polyomavirus VP1 complexes define a sialic acid binding site required for infection. Plos Pathog, 8, e1002738. PubMed id: 22910713
Date:
17-Jun-12     Release date:   05-Sep-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
C0JPK1  (C0JPK1_9POLY) -  VP1 (Fragment) from Merkel cell polyomavirus
Seq:
Struc:
422 a.a.
270 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
Plos Pathog 8:e1002738 (2012)
PubMed id: 22910713  
 
 
Structures of Merkel cell polyomavirus VP1 complexes define a sialic acid binding site required for infection.
U.Neu, H.Hengel, B.S.Blaum, R.M.Schowalter, D.Macejak, M.Gilbert, W.W.Wakarchuk, A.Imamura, H.Ando, M.Kiso, N.Arnberg, R.L.Garcea, T.Peters, C.B.Buck, T.Stehle.
 
  ABSTRACT  
 
No abstract given.

 

 

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