Ligand clusters for UniProt code A8EVM5

Ligand clusters for A8EVM5: Ion transport protein from Arcobacter butzleri (strain RM4018)

		Top 6 (of 11) ligand clusters Cluster 1. 16 ligand types 238 ligands Cluster 2. 6 ligand types 35 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 6 ligands Cluster 5. 2 ligand types 3 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 5klbA

Structures

PDB		Schematic diagram
5klbA
5vb2A
6p6yA
6mwaB
6mwbB
		more ...

Cluster 1 contains 16 ligand types

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Ligand		Description
		1. Ligand: MC3 × 32 dl-dimyristoylphosphatidylcholine 1,2-Dimyristoyl-Rac-Glycero-3-Phosphocholine PDB codes: 5klb(A), 5klg(A), 5kls(A), 5kmd(A), 5kmf(A), 5kmh(A), 6juh(A),
		2. Ligand: 6U9 × 1 nimodipine Nimodipine PDB code: 5kmf(A).
		3. Ligand: 6UB × 1 levamlodipine Amlodipine PDB code: 6ke5(B).
		4. Ligand: K4D × 1 flecainide Flecainide PDB code: 6mvx(A).
		5. Ligand: PX4 × 157 1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine PDB codes: 3rvy(A), 3rvz(A), 3rw0(A), 4ekw(A), 4ms2(A), 4mtf(A), 4mtg(A), 4mto(A), 4mvm(A), 4mvo(A), 4mvq(A), 4mvr(A), 4mvs(A), 4mvu(A), 4mvz(A), 4mw3(A), 4mw8(A), 5vb2(A), 5vb8(A), 5yua(A), 6c1e(A), 6c1k(A), 6c1p(A), 6keb(A), 6mvv(A), 6mvw(A), 6mvy(A), 6mwa(B), 6mwb(B), 6mwd(B), 6mwg(B), 6p6x(A), 6p6y(A),
		6. Ligand: CPS × 19 3-[(3-Cholamidopropyl)dimethylammonio]-1- Propanesulfonate PDB codes: 5klb(A), 5vb2(A), 6mwa(B), 6mwb(B), 6mwd(B), 6mwg(B), 6p6x(A), 6p6y(A),
		7. Ligand: PO4 × 8 Phosphate ion PDB codes: 4ekw(A), 5vb2(A), 6mvv(A), 6mvw(A), 6mvx(A),
		8. Ligand: G3P × 5 Sn-Glycerol-3-Phosphate PDB codes: 6juh(A), 6ke5(A),
		9. Ligand: 1N7 × 3 Chapso PDB codes: 5yua(A), 5yub(A), 5yuc(A).
		10. Ligand: LMT × 3 Dodecyl-Beta-D-Maltoside PDB codes: 5yua(A), 5yub(A), 5yuc(A).
		11. Ligand: LPC × 3 [1-Myristoyl-Glycerol-3-Yl]phosphonylcholine PDB codes: 6ke5(A),
		12. Ligand: 6U8 × 1 (2~{r})-2-(2-Bromophenyl)-5-[2-(3,4-Dimethoxyphenyl) ethyl-Methyl-Amino]-2-Propan-2-Yl- Pentanenitrile PDB code: 5kmh(A).
		13. Ligand: 6UC × 1 O3-Ethyl o5-Methyl (4r)-4-(2-Bromophenyl)-2-[2- (Dimethylamino)ethoxymethyl]-6-Methyl-1,4- Dihydropyridine-3,5-Dicarboxylate PDB code: 5klg(A).
		14. Ligand: BNC × 1 5-Beta-24-Nor-Cholane-3(alpha),7(alpha),12(alpha)-Triol PDB code: 6c1e(A).
		15. Ligand: C9X × 1 2-[Phenyl-(Phenylmethyl)amino]ethyl (4~{r})-5-(5,5- Dimethyl-2-Oxidanylidene-1,3,2l^{5}- Dioxaphosphinan- 2-Yl)-2,6-Dimethyl-4-(3-Nitrophenyl)-1,4- Dihydropyridine-3-Carboxylate PDB code: 6juh(A).
		16. Ligand: PX4-PX4 × 1 PX4=1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine. PDB code: 5yua(A).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: MC3 × 5 dl-dimyristoylphosphatidylcholine 1,2-Dimyristoyl-Rac-Glycero-3-Phosphocholine PDB codes: 5klb(A), 5klg(A), 5kls(A), 5kmd(A), 5kmf(A).
		2. Ligand: PX4 × 25 1,2-Dimyristoyl-Sn-Glycero-3-Phosphocholine PDB codes: 4ms2(A), 4mtf(A), 4mtg(A), 4mto(A), 4mvm(A), 4mvo(A), 4mvq(A), 4mvr(A), 4mvs(A), 4mvu(A), 4mvz(A), 4mw3(A), 4mw8(A), 5vb2(A), 5vb8(A), 6c1e(A), 6c1p(A), 6juh(A), 6keb(A), 6mvw(A), 6mvy(A), 6mwa(B), 6mwb(B), 6mwd(B), 6mwg(B).
		3. Ligand: PO4 × 2 Phosphate ion PDB codes: 6mvv(A), 6mvx(A).
		4. Ligand: G3P × 1 Sn-Glycerol-3-Phosphate PDB code: 6ke5(A).
		5. Ligand: LMT × 1 Dodecyl-Beta-D-Maltoside PDB code: 5yua(A).
		6. Ligand: PX6 × 1 1,2-Dipalmitoyl-Sn-Glycero-3-Phosphate PDB code: 5kmh(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: CPS × 1 3-[(3-Cholamidopropyl)dimethylammonio]-1- Propanesulfonate PDB code: 5klb(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 6 Sulfate ion PDB codes: 5vb8(A), 6c1k(A), 6mvy(A), 6mwa(B), 6mwb(B), 6mwd(B).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: ACT × 2 Acetate ion PDB codes: 6mwd(B), 6mwg(B).
_Na		2. Metal: _NA × 1 PDB code: 6c1k(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GAI × 1 guanidine Guanidine PDB code: 6c1k(A).