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Ligand clusters for UniProt code A0A2D0TCB4
Ligand clusters for A0A2D0TCB4: Heterodisulfide reductase, subunit B from Methanothermococcus thermolithotrophicus DSM 2095
4 ligand clusters
Cluster 1.
4 ligand types
10 ligands
Cluster 2.
4 ligand types
9 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 5odcB
Structures
PDB
Schematic diagram
5odc
B
5odr
B
5odq
B
5odi
B
5odh
B
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
COM × 3
coenzyme m
1-Thioethanesulfonic acid
PDB codes:
5odh
(B),
5odi
(B),
5odr
(B).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5odc
(B).
3. Ligand:
9S8 × 5
Non-Cubane [4fe-4s]-Cluster
PDB codes:
5odc
(B),
5odh
(B),
5odi
(B),
5odq
(B),
5odr
(B).
4. Ligand:
9SB × 1
2-Bromanylethanesulfonic acid
PDB code:
5odq
(B).
Cluster 2 contains 4 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5odh
(B),
2. Ligand:
9S8 × 5
Non-Cubane [4fe-4s]-Cluster
PDB codes:
5odc
(B),
5odh
(B),
5odi
(B),
5odq
(B),
5odr
(B).
3. Ligand:
9SB × 1
2-Bromanylethanesulfonic acid
PDB code:
5odq
(B).
4. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5odr
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
5odc
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
5odc
(B).