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PDBsum entry 3a0b
Go to PDB code:
Ligand/metal interactions
PDB id
3a0b
8 instances of ligand highlighted
MGE
Ligands
OEC
×2
OEC 1001(A)
OEC 6001(a)
CLA
×70
CLA 1003(A)
CLA 1006(A)
CLA 1007(A)
CLA 1009(B)
CLA 1010(B)
CLA 1011(B)
CLA 1012(B)
CLA 1013(B)
CLA 1014(B)
CLA 1015(B)
CLA 1016(B)
CLA 1018(B)
CLA 1019(B)
CLA 1020(B)
CLA 1021(B)
CLA 1022(B)
CLA 1023(B)
CLA 1024(B)
CLA 1025(C)
CLA 1026(C)
CLA 1027(C)
CLA 1028(C)
CLA 1029(C)
CLA 1030(C)
CLA 1031(C)
CLA 1032(C)
CLA 1033(C)
CLA 1034(C)
CLA 1035(C)
CLA 1036(C)
CLA 1037(C)
CLA 1004(D)
CLA 1005(D)
CLA 1008(D)
CLA 1017(H)
CLA 6003(a)
CLA 6006(a)
CLA 6007(a)
CLA 6009(b)
CLA 6010(b)
CLA 6011(b)
CLA 6012(b)
CLA 6013(b)
CLA 6014(b)
CLA 6015(b)
CLA 6016(b)
CLA 6017(b)
CLA 6018(b)
CLA 6019(b)
CLA 6020(b)
CLA 6021(b)
CLA 6022(b)
CLA 6023(b)
CLA 6024(b)
CLA 6025(c)
CLA 6026(c)
CLA 6027(c)
CLA 6028(c)
CLA 6029(c)
CLA 6030(c)
CLA 6031(c)
CLA 6032(c)
CLA 6033(c)
CLA 6034(c)
CLA 6035(c)
CLA 6036(c)
CLA 6037(c)
CLA 6004(d)
CLA 6005(d)
CLA 6008(d)
PHO
×4
PHO 1038(A)
PHO 1039(A)
PHO 6039(a)
PHO 6038(d)
PQ9
×4
PQ9 1043(A)
PQ9 1042(D)
PQ9 6043(a)
PQ9 6042(d)
BCR
×22
BCR 1044(A)
BCR 1045(B)
BCR 1047(B)
BCR 1048(B)
BCR 1054(C)
BCR 1050(D)
BCR 1049(H)
BCR 1051(K)
BCR 1052(K)
BCR 6046(T)
BCR 1053(Z)
BCR 6044(a)
BCR 6045(b)
BCR 6047(b)
BCR 6048(b)
BCR 6054(c)
BCR 6050(d)
BCR 6049(h)
BCR 6051(k)
BCR 6052(k)
BCR 1046(t)
BCR 6053(z)
LHG
×2
LHG 1063(A)
LHG 6063(a)
MGE
×8
MGE 1060(B)
MGE 1062(D)
MGE 1059(J)
MGE 1061(L)
MGE 6060(b)
MGE 6059(d)
MGE 6061(d)
MGE 6062(d)
DGD
×8
DGD 1055(C)
DGD 1056(C)
DGD 1057(C)
DGD 1058(H)
DGD 6055(c)
DGD 6056(c)
DGD 6057(c)
DGD 6058(h)
HEM
×4
HEM 1040(E)
HEM 1041(V)
HEM 6040(e)
HEM 6041(v)
Metals
_BR
×4
BR 1065(A)
BR 6065(a)
BR 6064(d)
BR 1064(A)
FE2
×2
FE2 1002(A)
FE2 6002(a)
Ligand
MGE
-
(1s)-2-(Alpha-L-Allopyranosyloxy)-1-
[(Tridecanoyloxy) methyl]ethyl palmitate
[Monogalactosyl-Diacylglycerol]
Formula:
C
38
H
72
O
10
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
DGD 1055(C)
66
66
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand MGE
List of
interactions
MGE 1060(B)
_BR
×4
FE2
×2
