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PDBsum entry 3a0b

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3a0b calculated with MOLE 2.0 PDB id
3a0b
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 1.41 111.7 -0.68 -0.17 16.3 77 9 9 7 14 5 1 0  OEC 1001 A BR 1064 A DGD 1057 C
2 1.24 3.35 37.3 2.82 0.96 2.4 80 0 1 1 15 3 0 0  
3 1.20 3.16 40.6 2.60 0.86 2.2 80 0 1 2 15 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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