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PDBsum entry 7cyc
Go to PDB code:
Ligand/metal interactions
PDB id
7cyc
3 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG-BMA-MAN-
MAN-MAN-MAN
×3
NAG 1(D) to MAN 7(D)
NAG-NAG-BMA
×6
NAG 1(E) to BMA 3(E)
NAG 1(G) to BMA 3(G)
NAG-NAG
×3
NAG 1(F) to NAG 2(F)
NAG
×48
NAG 1201(A)
NAG 1202(A)
NAG 1203(A)
NAG 1204(A)
NAG 1205(A)
NAG 1206(A)
NAG 1207(A)
NAG 1208(A)
NAG 1209(A)
NAG 1210(A)
NAG 1211(A)
NAG 1212(A)
NAG 1213(A)
NAG 1214(A)
NAG 1215(A)
NAG 1216(A)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(F)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(F)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(F) to NAG 2(F)
also representing 2 other equivalent ligands:
NAG 1(J) to NAG 2(J)
NAG 1(N) to NAG 2(N)
