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PDBsum entry 4jvm
Go to PDB code:
Ligand/metal interactions
PDB id
4jvm
2 instances of ligand highlighted
A3P
Ligands
XDI
×2
XDI 501(A)
A3P
×2
A3P 502(A)
EDO
×4
EDO 504(A)
EDO 505(A)
Metals
_NA
×3
NA 306(B)
NA 503(A)
Ligand
A3P
-
Adenosine-3'-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
10
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
A3P 502(A)
27
27
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
A3P 502(A)
O3P: O1P
|
O1P: O3P
|
O6P: O4P
|
O4P: O6P
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's product adenosine 3',5'-bisphosphate
LIGPLOT
of interactions involving ligand A3P
List of
interactions
A3P 502(A)
(also representing equivalent ligand A3P 302(B) )
_NA
×3
