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PDBsum entry 4jvm
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Tunnel analysis for: 4jvm calculated with  MOLE 2.0
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PDB id
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4jvm
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.63 |
1.63 |
20.1 |
0.44 |
0.58 |
12.1 |
67 |
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3 |
0 |
0 |
3 |
5 |
0 |
1 |
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XDI 301 B A3P 302 B
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2 |
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1.57 |
1.57 |
23.2 |
0.44 |
0.47 |
13.9 |
72 |
4 |
1 |
0 |
6 |
5 |
0 |
1 |
XDI 301 B A3P 302 B
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3 |
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1.41 |
1.41 |
23.9 |
-0.50 |
0.13 |
10.0 |
80 |
3 |
0 |
2 |
2 |
4 |
0 |
0 |
A3P 302 B
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4 |
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1.59 |
1.88 |
27.0 |
-0.76 |
-0.04 |
10.8 |
81 |
3 |
0 |
3 |
3 |
4 |
0 |
0 |
A3P 302 B
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5 |
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1.56 |
1.87 |
36.4 |
-0.19 |
0.18 |
12.8 |
76 |
5 |
0 |
2 |
4 |
6 |
0 |
1 |
XDI 301 B A3P 302 B
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6 |
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1.57 |
1.85 |
39.5 |
-0.22 |
0.08 |
13.4 |
78 |
6 |
1 |
2 |
7 |
6 |
0 |
1 |
XDI 301 B A3P 302 B
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7 |
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1.26 |
2.52 |
16.4 |
-0.84 |
-0.24 |
12.2 |
86 |
2 |
1 |
2 |
2 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program