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PDBsum entry 3d5o
Go to PDB code:
Ligand/metal interactions
PDB id
3d5o
5 instances of ligand highlighted
NAG
Ligands
SO4
×16
SO4 205(A)
SO4 206(A)
SO4 207(A)
SO4 178(F)
NAG
×5
NAG 208(A)
GOL
GOL 179(F)
Ligand
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 208(A)
15
15
1
1
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG
List of
interactions
NAG 208(A)
also representing 4 other equivalent ligands:
NAG 208(B)
NAG 208(C)
NAG 208(D)
NAG 208(E)
