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PDBsum entry 6wpf
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Ligand/metal interactions
PDB id
6wpf
Ligand highlighted
D4M
Ligands
D4M
D4M 901(P)
SO4
×4
SO4 902(P)
SO4 801(T)
SO4 604(A)
SO4 605(A)
D4T
D4T 603(A)
GOL
GOL 501(B)
Metals
_MG
×3
MG 903(P)
MG 601(A)
MG 602(A)
Ligand
D4M
-
[(5r)-5-(5-Methyl-2,4-Dioxo-3,4-Dihydropyrimidin-1(2h)-
Yl)-2,5-Dihydrofuran-2-Yl]methyl dihydrogen phosphate
[2',3'-Dideoxy-2',3-Didehydrothymidine 5'-
Monophosphate; 2',3'-Dehydro-2',3'-Deoxy-Thymidine 5'-
Monophosphate]
Formula:
C
10
H
13
N
2
O
7
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
D4M 901(P)
20
20
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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List of
interactions
D4M 901(P)
_MG
×3
