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PDBsum entry 6wpf
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Pore analysis for: 6wpf calculated with  MOLE 2.0
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PDB id
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6wpf
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.39 |
1.40 |
46.3 |
-0.90 |
-0.26 |
14.0 |
77 |
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6 |
5 |
2 |
6 |
4 |
0 |
0 |
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2 |
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1.35 |
1.38 |
66.5 |
-0.60 |
-0.37 |
12.5 |
83 |
7 |
3 |
2 |
6 |
0 |
2 |
0 |
GOL 501 B DT 813 P DC 814 P DG 710 T DA 718 T DG
719 T
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3 |
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2.36 |
2.37 |
73.6 |
-0.75 |
-0.59 |
12.5 |
77 |
4 |
1 |
0 |
3 |
0 |
0 |
0 |
DT 813 P DC 814 P DG 815 P DG 816 P G47 817 P DC
818 P SO4 902 P DA 705 T DC 706 T DG 707 T DG 708
T DC 709 T DG 710 T DC 711 T DG 714 T DA 715 T DA
718 T DG 719 T SO4 801 T
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4 |
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1.32 |
1.34 |
94.3 |
-0.49 |
-0.42 |
10.7 |
81 |
7 |
2 |
2 |
5 |
0 |
2 |
0 |
GOL 501 B DT 813 P DC 814 P DG 815 P DG 816 P G47
817 P DC 818 P SO4 902 P DA 705 T DC 706 T DG 707
T DG 708 T DC 709 T DG 710 T DC 711 T DG 714 T DA
715 T DA 716 T SO4 801 T
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5 |
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1.85 |
2.11 |
96.6 |
-1.70 |
-0.56 |
23.8 |
79 |
8 |
6 |
0 |
3 |
0 |
1 |
0 |
MG 602 A D4T 603 A DG 815 P DG 816 P G47 817 P DC
818 P DG 819 P DC 820 P DC 821 P DG 822 P D4M 901
P DG 704 T DA 705 T DC 706 T DG 714 T DA 715 T DA
716 T
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6 |
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1.70 |
3.02 |
111.8 |
-1.86 |
-0.34 |
25.9 |
78 |
7 |
7 |
2 |
2 |
1 |
4 |
0 |
D4T 603 A D4M 901 P
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7 |
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2.10 |
2.17 |
115.2 |
-1.76 |
-0.61 |
23.4 |
80 |
10 |
7 |
0 |
4 |
0 |
1 |
0 |
MG 602 A D4T 603 A DT 813 P DC 814 P DG 815 P DG
816 P DC 818 P DG 819 P DC 820 P DC 821 P DG 822
P D4M 901 P SO4 902 P DG 703 T DG 704 T DA 705 T
DC 706 T DG 707 T DG 708 T DC 709 T DG 710 T DC
711 T DA 718 T DG 719 T SO4 801 T
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8 |
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2.20 |
2.34 |
149.1 |
-1.33 |
-0.47 |
17.7 |
77 |
9 |
3 |
2 |
4 |
1 |
3 |
0 |
DT 813 P DC 814 P DG 815 P DG 816 P DC 818 P DG
819 P DC 820 P DC 821 P D4M 901 P SO4 902 P DG
703 T DG 704 T DA 705 T DC 706 T DG 707 T DG 708
T DC 709 T DG 710 T DC 711 T DA 718 T DG 719 T S
O4 801 T
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9 |
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1.35 |
1.38 |
170.0 |
-0.90 |
-0.39 |
13.9 |
80 |
11 |
4 |
4 |
6 |
1 |
5 |
0 |
GOL 501 B DT 813 P DC 814 P DG 815 P DG 816 P DC
818 P DG 819 P DC 820 P DC 821 P D4M 901 P SO4
902 P DG 703 T DG 704 T DA 705 T DC 706 T DG 707
T DG 708 T DC 709 T DG 710 T DC 711 T SO4 801 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program