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PDBsum entry 6pc5
Go to PDB code:
Ligand/metal interactions
PDB id
6pc5
Ligand highlighted
MHW-THR-DBB-PRO-
MEA-MHV-004
Ligands
MHW-THR-DBB-PRO-
MEA-MHV-004
MHW 1(C) to 004 7(C)
O7V
O7V 3001(I)
Ligand
MHW-THR-DBB-PRO-MEA-MHV-004
MHW
-
3-Hydroxypicolinic acid
Formula:
C
6
H
5
NO
3
DBB
-
D-Alpha-Aminobutyric acid
Formula:
C
4
H
9
NO
2
MEA
-
N-Methylphenylalanine
Formula:
C
10
H
13
NO
2
MHV
-
4-Oxo-L-Pipecolic acid
Formula:
C
6
H
9
NO
3
004
-
(2s)-Amino(phenyl)ethanoic acid [L-Phenylglycine]
Formula:
C
8
H
9
NO
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
MHW 1(C)
10
10
1
1
Complete
Chiral checks - OK
THR 2(C)
8
8
1
1
Complete
Chiral checks - OK
DBB 3(C)
7
7
1
1
Complete
Chiral checks - OK
PRO 4(C)
8
8
1
1
Complete
Chiral checks - OK
MEA 5(C)
13
13
2
1
Complete
Chiral checks - OK
MHV 6(C)
10
10
1
1
Complete
Chiral checks - OK
004 7(C)
11
11
1
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
MHW 1(C)
-
0
THR 2(C)
-
0
DBB 3(C)
O: OXT
1
PRO 4(C)
-
0
MEA 5(C)
-
0
MHV 6(C)
-
0
004 7(C)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand MHW-THR-DBB-PRO-MEA-MHV-004
List of
interactions
MHW 1(C) to 004 7(C)
