Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 4d0d
Go to PDB code:
Ligand/metal interactions
PDB id
4d0d
4 instances of ligand highlighted
VAL-ILE-PHE-PRO-
ALA-LYS-SER-LEU
Ligands
VAL-ILE-PHE-PRO-
ALA-LYS-SER-LEU
×4
VAL 1(C) to LEU 8(C)
Ligand
VAL-ILE-PHE-PRO-ALA-LYS-SER-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
VAL 1(C)
8
8
1
1
0
0
0
0
0
0
ILE 2(C)
9
9
1
1
0
0
0
0
0
0
PHE 3(C)
12
12
1
1
0
0
0
0
0
0
PRO 4(C)
8
8
1
1
0
0
0
0
0
0
ALA 5(C)
6
-
-
-
-
-
-
-
-
-
LYS 6(C)
10
10
1
1
0
0
0
0
0
0
SER 7(C)
7
6
0
0
1
0
-
-
-
-
LEU 8(C)
9
9
0
0
0
0
0
0
0
0
Advanced Analysis
Residue
Name Mismatches
Count
VAL 1(C)
-
0
ILE 2(C)
O: OXT
1
PHE 3(C)
-
0
PRO 4(C)
-
0
ALA 5(C)
-
0
LYS 6(C)
-
0
SER 7(C)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
LEU 8(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand VAL-ILE-PHE-PRO-ALA-LYS-SER-LEU
List of
interactions
VAL 1(C) to LEU 8(C)
also representing 3 other equivalent ligands:
VAL 1(F) to LEU 8(F)
VAL 1(I) to LEU 8(I)
VAL 1(L) to LEU 8(L)
