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PDBsum entry 1yiy

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Ligand/metal interactions PDB id
1yiy
2 instances of ligand highlighted
PMP
Ligands
PMP ×2
PMP 500(A)
Metals
_BR ×5
BR 602(A)
BR 603(A)
BR 605(A)
BR 604(B)
  
Ligand PMP - 4'-Deoxy-4'-Aminopyridoxal-5'-Phosphate
[Pyridoxamine-5'-Phosphate]
Formula: C8H13N2O5P
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
PMP 500(A) 16 16 0 0 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
PMP 500(A) O3P: O1P|O1P: O2P 2
Additional Information
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Ligand matches this enzyme's cofactor pyridoxal 5'-phosphate with similarity 88.24%


LIGPLOT of interactions involving ligand PMP

JSmol




List of
interactions
 


PMP 500(A)

(also representing equivalent ligand PMP 501(B) )
  
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