PDBsum entry 1yiy Go to PDB code:  Pore analysis for: 1yiy calculated with MOLE 2.0 PDB id 1yiy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.60 28.1 -0.68 -0.15 13.3 80 2 2 3 2 2 0 0   2 1.19 1.20 46.7 0.11 0.26 4.8 71 2 0 1 8 8 1 0  PMP 500 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.