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PDBsum entry 4d5e

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protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
4d5e

 

 

 

 

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Contents
Protein chains
586 a.a.
Ligands
FAD ×2
TPP ×2
MES ×2
P6G ×2
1PG
PG4 ×9
PEG
2PE ×3
Metals
_CL ×2
_MG ×3
Waters ×970
PDB id:
4d5e
Name: Hydrolase
Title: Crystal structure of recombinant wildtype cdh
Structure: Cyclohexane-1,2-dione hydrolase. Chain: a, b. Engineered: yes
Source: Azoarcus sp. Bh72. Organism_taxid: 62928. Strain: bh72. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.43Å     R-factor:   0.123     R-free:   0.147
Authors: S.Loschonsky,T.Wacker,S.Waltzer,P.P.Giovannini,M.J.Mcleish, S.L.A.Andrade,M.Mueller
Key ref: S.Loschonsky et al. (2014). Extended reaction scope of thiamine diphosphate dependent cyclohexane-1,2-dione hydrolase: from C-C bond cleavage to C-C bond ligation. Angew Chem Int Ed Engl, 53, 14402-14406. PubMed id: 25382418 DOI: 10.1002/anie.201408287
Date:
03-Nov-14     Release date:   21-Jan-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P0CH62  (CHDH_AZOSP) -  Cyclohexane-1,2-dione hydrolase from Azoarcus sp
Seq:
Struc:
 
Seq:
Struc:
589 a.a.
586 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.7.1.11  - cyclohexane-1,2-dione hydrolase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: cyclohexan-1,2-dione + H2O = 6-oxohexanoate + H+
cyclohexan-1,2-dione
+ H2O
= 6-oxohexanoate
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Key reference    
 
 
DOI no: 10.1002/anie.201408287 Angew Chem Int Ed Engl 53:14402-14406 (2014)
PubMed id: 25382418  
 
 
Extended reaction scope of thiamine diphosphate dependent cyclohexane-1,2-dione hydrolase: from C-C bond cleavage to C-C bond ligation.
S.Loschonsky, T.Wacker, S.Waltzer, P.P.Giovannini, M.J.McLeish, S.L.Andrade, M.Müller.
 
  ABSTRACT  
 
ThDP-dependent cyclohexane-1,2-dione hydrolase (CDH) catalyzes the CC bond cleavage of cyclohexane-1,2-dione to 6-oxohexanoate, and the asymmetric benzoin condensation between benzaldehyde and pyruvate. One of the two reactivities of CDH was selectively knocked down by mutation experiments. CDH-H28A is much less able to catalyze the CC bond formation, while the ability for CC bond cleavage is still intact. The double variant CDH-H28A/N484A shows the opposite behavior and catalyzes the addition of pyruvate to cyclohexane-1,2-dione, resulting in the formation of a tertiary alcohol. Several acyloins of tertiary alcohols are formed with 54-94 % enantiomeric excess. In addition to pyruvate, methyl pyruvate and butane-2,3-dione are alternative donor substrates for CC bond formation. Thus, the very rare aldehyde-ketone cross-benzoin reaction has been solved by design of an enzyme variant.
 

 

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