PDBsum entry 4d5e Go to PDB code:  Pore analysis for: 4d5e calculated with MOLE 2.0 PDB id 4d5e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.50 41.5 0.40 0.08 5.1 77 2 0 2 7 3 1 0  FAD 1588 A 2 1.26 1.41 46.1 -1.72 -0.68 17.8 96 5 2 5 2 0 0 0  PG4 1596 A FAD 1589 B PG4 1601 B 3 1.27 1.38 48.0 0.12 -0.04 5.5 75 3 0 4 6 3 1 1  PG4 1596 A FAD 1589 B PG4 1601 B 4 1.91 4.89 50.8 -0.19 -0.06 10.6 82 5 2 5 5 3 1 1  FAD 1589 B 5 1.36 1.48 51.2 -1.77 -0.63 20.2 95 6 2 2 2 0 0 0  FAD 1588 A 6 1.60 4.04 52.5 -0.36 -0.14 11.1 83 5 2 4 6 3 1 0  FAD 1588 A 7 1.24 2.27 74.1 0.64 0.41 12.3 75 7 2 2 21 4 2 0  TPP 1589 A CL 1591 A TPP 1590 B CL 1592 B 8 1.24 1.50 127.6 0.04 0.11 10.2 83 10 2 11 20 8 0 1  FAD 1588 A TPP 1589 A CL 1591 A PG4 1596 A FAD 1589 B TPP 1590 B CL 1592 B PG4 1601 B 9 1.28 1.49 146.7 -0.14 0.10 13.3 86 16 6 11 19 8 0 1  FAD 1588 A TPP 1589 A CL 1591 A FAD 1589 B TPP 1590 B CL 1592 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.