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PDBsum entry 3nid

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protein ligands metals Protein-protein interface(s) links
Cell adhesion/blood clotting PDB id
3nid

 

 

 

 

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Contents
Protein chains
454 a.a. *
466 a.a. *
214 a.a. *
214 a.a. *
Ligands
NAG-NAG-MAN-MAN-
MAN
NAG-NAG ×2
NAG-NAG-MAN
GOL ×9
SO4 ×10
NAG ×2
Metals
_CA ×12
_MG ×2
Waters ×1059
* Residue conservation analysis
PDB id:
3nid
Name: Cell adhesion/blood clotting
Title: The closed headpiece of integrin alphaiib beta3 and its complex with an alpahiib beta3 -specific antagonist that does not induce opening
Structure: Integrin alpha-iib. Chain: a, c. Fragment: integrin alpha-iib, residues 32-488. Synonym: platelet membrane glycoprotein iib, gpalpha iib, gpiib, integrin alpha-iib heavy chain. Engineered: yes. Integrin beta-3. Chain: b, d. Fragment: integrin beta-3, residues 27-497.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: itga2b, gp2b, itgab. Expressed in: cricetulus griseus. Expression_system_taxid: 10029. Expression_system_cell_line: lec 3.2.8.1. Expression_system_cell: cho. Gene: itgb3, gp3a.
Resolution:
2.30Å     R-factor:   0.180     R-free:   0.215
Authors: J.H.Zhu,J.Q.Zhu,T.A.Springer
Key ref: J.Zhu et al. (2010). Closed headpiece of integrin αIIbβ3 and its complex with an αIIbβ3-specific antagonist that does not induce opening. Blood, 116, 5050-5059. PubMed id: 20679525
Date:
15-Jun-10     Release date:   22-Dec-10    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P08514  (ITA2B_HUMAN) -  Integrin alpha-IIb from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1039 a.a.
454 a.a.
Protein chains
Pfam   ArchSchema ?
P05106  (ITB3_HUMAN) -  Integrin beta-3 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
788 a.a.
466 a.a.
Protein chains
No UniProt id for this chain
Struc: 214 a.a.
Protein chains
No UniProt id for this chain
Struc: 214 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
Blood 116:5050-5059 (2010)
PubMed id: 20679525  
 
 
Closed headpiece of integrin αIIbβ3 and its complex with an αIIbβ3-specific antagonist that does not induce opening.
J.Zhu, J.Zhu, A.Negri, D.Provasi, M.Filizola, B.S.Coller, T.A.Springer.
 
  ABSTRACT  
 
No abstract given.

 

 

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