spacer
spacer

PDBsum entry 2hlq

Go to PDB code: 
protein links
Transferase PDB id
2hlq

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
100 a.a. *
Waters ×92
* Residue conservation analysis
PDB id:
2hlq
Name: Transferase
Title: Crystal structure of the extracellular domain of the type ii bmp receptor
Structure: Bone morphogenetic protein receptor type-2. Chain: a. Fragment: residues 32-131. Synonym: bone morphogenetic receptor type ii, bmprii. Engineered: yes
Source: Ovis aries. Sheep. Organism_taxid: 9940. Gene: bmprii. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
1.45Å     R-factor:   0.192     R-free:   0.232
Authors: P.D.Mace,J.F.Cutfield,S.M.Cutfield
Key ref: P.D.Mace et al. (2006). High resolution structures of the bone morphogenetic protein type II receptor in two crystal forms: implications for ligand binding. Biochem Biophys Res Commun, 351, 831-838. PubMed id: 17094948 DOI: 10.1016/j.bbrc.2006.10.109
Date:
09-Jul-06     Release date:   28-Nov-06    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q13873  (BMPR2_HUMAN) -  Bone morphogenetic protein receptor type-2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1038 a.a.
100 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.30  - receptor protein serine/threonine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[receptor-protein] + ATP = O-phospho-L-seryl-[receptor- protein] + ADP + H+
2. L-threonyl-[receptor-protein] + ATP = O-phospho-L-threonyl-[receptor- protein] + ADP + H+
L-seryl-[receptor-protein]
+ ATP
= O-phospho-L-seryl-[receptor- protein]
+ ADP
+ H(+)
L-threonyl-[receptor-protein]
+ ATP
= O-phospho-L-threonyl-[receptor- protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1016/j.bbrc.2006.10.109 Biochem Biophys Res Commun 351:831-838 (2006)
PubMed id: 17094948  
 
 
High resolution structures of the bone morphogenetic protein type II receptor in two crystal forms: implications for ligand binding.
P.D.Mace, J.F.Cutfield, S.M.Cutfield.
 
  ABSTRACT  
 
BMPRII is a type II TGF-beta serine threonine kinase receptor which is integral to the bone morphogenetic protein (BMP) signalling pathway. It is known to bind BMP and growth differentiation factor (GDF) ligands, and has overlapping ligand specificity with the activin type II receptor, ActRII. In contrast to activin and TGF-beta type ligands, BMPs bind to type II receptors with lower affinity than type I receptors. Crystals of the BMPRII ectodomain were grown in two different forms, both of which diffracted to high resolution. The tetragonal form exhibited some disorder, whereas the entire polypeptide was seen in the orthorhombic form. The two structures retain the basic three-finger toxin fold of other TGF-beta receptor ectodomains, and share the main hydrophobic patch used by ActRII to bind various ligands. However, they present different conformations of the A-loop at the periphery of the proposed ligand-binding interface, in conjunction with rearrangement of a disulfide bridge within the loop. This particular disulfide (Cys94-Cys117) is only present in BMPRII and activin receptors, suggesting that it is important for their likely shared mode of binding. Evidence is presented that the two crystal forms represent ligand-bound and free conformations of BMPRII. Comparison with the solved structure of ActRII bound to BMP2 suggests that His87, unique amongst TGF-beta receptors, may play a key role in ligand recognition.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
20615094 A.Sun, S.S.Murray, R.J.Simon, J.Jawien, K.Behnam, T.A.Miller, and E.J.Brochmann (2010).
Alanine-scanning mutations of the BMP-binding domain of recombinant secretory bovine spp24 affect cytokine binding.
  Connect Tissue Res, 51, 445-451.  
19926516 J.Nickel, W.Sebald, J.C.Groppe, and T.D.Mueller (2009).
Intricacies of BMP receptor assembly.
  Cytokine Growth Factor Rev, 20, 367-377.  
18485004 A.Galat, G.Gross, P.Drevet, A.Sato, and A.Ménez (2008).
Conserved structural determinants in three-fingered protein domains.
  FEBS J, 275, 3207-3225.  
18160401 A.Kotzsch, J.Nickel, A.Seher, K.Heinecke, L.van Geersdaele, T.Herrmann, W.Sebald, and T.D.Mueller (2008).
Structure analysis of bone morphogenetic protein-2 type I receptor complexes reveals a mechanism of receptor inactivation in juvenile polyposis syndrome.
  J Biol Chem, 283, 5876-5887.
PDB codes: 2qj9 2qja 2qjb
18253966 C.Sintuu, S.S.Murray, K.Behnam, R.Simon, J.Jawien, J.D.Silva, M.E.Duarte, and E.J.Brochmann (2008).
Full-length bovine spp24 [spp24 (24-203)] inhibits BMP-2 induced bone formation.
  J Orthop Res, 26, 753-758.  
18243111 J.Groppe, C.S.Hinck, P.Samavarchi-Tehrani, C.Zubieta, J.P.Schuermann, A.B.Taylor, P.M.Schwarz, J.L.Wrana, and A.P.Hinck (2008).
Cooperative assembly of TGF-beta superfamily signaling complexes is mediated by two disparate mechanisms and distinct modes of receptor binding.
  Mol Cell, 29, 157-168.
PDB code: 2pjy
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.

 

spacer

spacer