› 7yzu

X-ray diffraction
1.59Å resolution

Crystal structure of the sulfoquinovosyl binding protein SmoF complexed with SQMe

Released:
DOI: 10.2210/pdb7yzu/pdb
PDB entry 7yzu coloured by chain, front view.
PDB entry 7yzu coloured by chain, side view.
PDB entry 7yzu coloured by chain, top view.
Source organism: Agrobacterium tumefaciens
Primary publication:
The sulfoquinovosyl glycerol binding protein SmoF binds and accommodates plant sulfolipids.
Snow AJD, Sharma M, Lingford JP, Zhang Y, Mui JW, Epa R, Goddard-Borger ED, Williams SJ, Davies GJ
Curr Res Struct Biol 4 51-58 (2022)
PMID: 35341160

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-221597 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Sulfoquinovosyl glycerol-binding protein SmoF Chain: A
Molecule details ›
Chain: A
Length: 396 amino acids
Theoretical weight: 44.07 KDa
Source organism: Agrobacterium tumefaciens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A9CEY9 (Residues: 30-416; Coverage: 100%)
Gene names: Atu3282, smoF
Sequence domains: Bacterial extracellular solute-binding protein

Ligands and Environments

1 bound ligand:
Ligand DO7 1 x DO7
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P212121
Unit cell:
a: 66.27Å b: 99.38Å c: 53.76Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.239 0.238 0.267
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 citations in other articles

Oxygenolytic sulfoquinovose degradation by an iron-dependent alkanesulfonate dioxygenase.
Ye et al. (2023)

1 mention without citation

The sulfoquinovosyl glycerol binding protein SmoF binds and accommodates plant sulfolipids.
Snow et al. (2022)