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Activator of the 2-Hydroxyisocaproyl-CoA Dehydratase from Clostridium difficile with bound ADPNP

X-ray diffraction
1.6Å resolution
PDB entry 4ehu coloured by chain, front view.
PDB entry 4ehu coloured by chain, side view.
PDB entry 4ehu coloured by chain, top view.
Source organism: Clostridioides difficile
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: 2-hydroxyisocaproyl-CoA dehydratase activator
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Multimeric state: homo dimer
Accessible surface area: 22702.41 Å2
Buried surface area: 4734.47 Å2
Dissociation area: 628.16 Å2
Dissociation energy (ΔGdiss): 3.76 kcal/mol
Dissociation entropy (TΔSdiss): 13.2 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-178356

Macromolecules

2-hydroxyisocaproyl-CoA dehydratase activator
Chains: A, B
Length: 276 amino acids
Theoretical weight: 29.66 KDa
Source organism: Clostridioides difficile
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q5U925 (Residues: 1-266; Coverage: 100%)
Gene names: BN1095_530010, BN1096_180047, BN1097_160049, CD630DERM_03960, ERS445050_03311, PCZ31_0395, fldI_1, hadI, lcdC
Pfam: BadF/BadG/BcrA/BcrD ATPase family
InterPro:
CATH: Nucleotidyltransferase; domain 5
2-hydroxyisocaproyl-CoA dehydratase activator in PDB entry 4ehu, assembly 1, front view.
2-hydroxyisocaproyl-CoA dehydratase activator in PDB entry 4ehu, assembly 1, side view.
2-hydroxyisocaproyl-CoA dehydratase activator in PDB entry 4ehu, assembly 1, top view.
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