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Crystal structure of putative TetR transcriptional regulator (YP_510936.1) from Jannaschia sp. CCS1 at 1.79 A resolution

Source organism: Jannaschia sp. CCS1
Biochemical function: DNA-binding transcription factor activity
Biological process: regulation of DNA-templated transcription
Cellular component: not assigned

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF13305
Domain description: Tetracyclin repressor-like, C-terminal domain
Occurring in:
  1. HTH tetR-type domain-containing protein
The deposited structure of PDB entry 3cjd contains 2 copies of Pfam domain PF13305 (Tetracyclin repressor-like, C-terminal domain) in HTH tetR-type domain-containing protein. Showing 1 copy in chain A.

PF00440
Domain description: Bacterial regulatory proteins, tetR family
Occurring in:
  1. HTH tetR-type domain-containing protein
The deposited structure of PDB entry 3cjd contains 2 copies of Pfam domain PF00440 (Bacterial regulatory proteins, tetR family) in HTH tetR-type domain-containing protein. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR001647
Domain description: DNA-binding HTH domain, TetR-type
Occurring in:
  1. HTH tetR-type domain-containing protein
IPR025996
Domain description: HTH-type transcriptional regulator MT1864/Rv1816-like, C-terminal domain
Occurring in:
  1. HTH tetR-type domain-containing protein
IPR036271
Domain description: Tetracyclin repressor-like, C-terminal domain superfamily
Occurring in:
  1. HTH tetR-type domain-containing protein
IPR009057
Domain description: Homeobox-like domain superfamily
Occurring in:
  1. HTH tetR-type domain-containing protein

Structure domain

CATH CATH domain
1.10.357.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Tetracycline Repressor; domain 2
Homology: Tetracycline Repressor, domain 2
Occurring in:
  1. HTH tetR-type domain-containing protein
The deposited structure of PDB entry 3cjd contains 2 copies of CATH domain 1.10.357.10 (Tetracycline Repressor; domain 2) in HTH tetR-type domain-containing protein. Showing 1 copy in chain A.

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