Function and Biology

Solution structure of the double PHD (plant homeodomain) fingers of human transcriptional protein DPF3b bound to a histone H4 peptide containing N-terminal acetylation at Serine 1

Source organism: Homo sapiens
Biochemical function: DNA binding
Biological process: not assigned
Cellular component: nucleosome

GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF00628
Domain description: PHD-finger
Occurring in:
  1. Zinc finger protein DPF3
The deposited structure of PDB entry 2kwo contains 2 copies of Pfam domain PF00628 (PHD-finger) in Zinc finger protein DPF3. Showing 2 copies in chain B [auth A].

InterPro InterPro annotations
IPR019787
Domain description: Zinc finger, PHD-finger
Occurring in:
  1. Zinc finger protein DPF3
IPR011011
Domain description: Zinc finger, FYVE/PHD-type
Occurring in:
  1. Zinc finger protein DPF3
IPR001965
Domain description: Zinc finger, PHD-type
Occurring in:
  1. Zinc finger protein DPF3
IPR019809
Domain description: Histone H4, conserved site
Occurring in:
  1. Histone H4
IPR019786
Domain description: Zinc finger, PHD-type, conserved site
Occurring in:
  1. Zinc finger protein DPF3
IPR013083
Domain description: Zinc finger, RING/FYVE/PHD-type
Occurring in:
  1. Zinc finger protein DPF3

Structure domain

CATH CATH domain
3.30.40.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Herpes Virus-1
Homology: Zinc/RING finger domain, C3HC4 (zinc finger)
Occurring in:
  1. Zinc finger protein DPF3
The deposited structure of PDB entry 2kwo contains 1 copy of CATH domain 3.30.40.10 (Herpes Virus-1) in Zinc finger protein DPF3. Showing 1 copy in chain B [auth A].