6hog

X-ray diffraction
1.26Å resolution

Function and Biology Details

Reaction catalysed:
ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate
Biochemical function:
Cellular component:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
PDBe Complex ID:
PDB-CPX-131839 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Gamma-aminobutyric acid receptor-associated protein; Phosphatidylinositol 3-kinase catalytic subunit type 3 Chain: A
Molecule details ›
Chain: A
Length: 129 amino acids
Theoretical weight: 15.19 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8NEB9 (Residues: 244-258, 262-262; Coverage: 2%)
  • Canonical: O95166 (Residues: 2-112; Coverage: 95%)
Gene names: FLC3B, GABARAP, HT004, PIK3C3, VPS34
Sequence domains: Autophagy protein Atg8 ubiquitin like

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: R3
Unit cell:
a: 92.1Å b: 92.1Å c: 41.23Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.156 0.154 0.181
Expression system: Escherichia coli