Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ZJO    

Bonds between two atoms of the molecule

Total Number of Bonds: 63


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C14 C10 C C doub 1.38 N Y
2 C14 C18 C C sing 1.38 N Y
3 C10 C7 C C sing 1.38 N Y
4 C18 C2 C C doub 1.38 N Y
5 C7 C3 C C doub 1.39 N Y
6 C2 C3 C C sing 1.39 N Y
7 C3 N3 C N sing 1.4 N N
8 C27 C30 C C doub 1.38 N Y
9 C27 C23 C C sing 1.38 N Y
10 C30 C28 C C sing 1.38 N Y
11 C23 C9 C C doub 1.39 N Y
12 N3 RU1 N RU sing 1.87 N N
13 N3 C16 N C sing 1.53 N N
14 RU1 N2 RU N sing 1.87 N N
15 RU1 RU2 RU RU sing 2.55 N N
16 C28 C21 C C doub 1.38 N Y
17 C9 C21 C C sing 1.39 N Y
18 C9 N2 C N sing 1.4 N N
19 C16 N4 C N sing 1.5 N N
20 N2 C13 N C sing 1.53 N N
21 N4 RU2 N RU sing 1.94 N N
22 N4 C1 N C sing 1.4 N N
23 RU2 N1 RU N sing 1.94 N N
24 RU2 O5 RU O sing 1.84 N N
25 C13 N1 C N sing 1.51 N N
26 C1 C4 C C doub 1.39 N Y
27 C1 C11 C C sing 1.39 N Y
28 N1 C5 N C sing 1.4 N N
29 C4 C12 C C sing 1.38 N Y
30 C11 C17 C C doub 1.38 N Y
31 C5 C15 C C doub 1.39 N Y
32 C5 C20 C C sing 1.39 N Y
33 C12 C6 C C doub 1.38 N Y
34 C17 C6 C C sing 1.38 N Y
35 C15 C25 C C sing 1.38 N Y
36 C20 C26 C C doub 1.38 N Y
37 C25 C29 C C doub 1.38 N Y
38 C26 C29 C C sing 1.38 N Y
39 C2 H1 C H sing 1.08 N N
40 C4 H2 C H sing 1.08 N N
41 C6 H3 C H sing 1.08 N N
42 C7 H4 C H sing 1.08 N N
43 C10 H5 C H sing 1.08 N N
44 C11 H6 C H sing 1.08 N N
45 C12 H7 C H sing 1.08 N N
46 C13 H8 C H sing 1.09 N N
47 C13 H9 C H sing 1.09 N N
48 C14 H10 C H sing 1.08 N N
49 C15 H11 C H sing 1.08 N N
50 C16 H12 C H sing 1.09 N N
51 C16 H13 C H sing 1.09 N N
52 C17 H14 C H sing 1.08 N N
53 C18 H15 C H sing 1.08 N N
54 C20 H16 C H sing 1.08 N N
55 C21 H17 C H sing 1.08 N N
56 C23 H18 C H sing 1.08 N N
57 C25 H19 C H sing 1.08 N N
58 C26 H20 C H sing 1.08 N N
59 C27 H21 C H sing 1.08 N N
60 C28 H22 C H sing 1.08 N N
61 C29 H23 C H sing 1.08 N N
62 C30 H24 C H sing 1.08 N N
63 O5 H25 O H sing 0.97 N N