Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Z3K    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.53 N N
2 C1 O5 C O sing 1.43 N N
3 C1 S1 C S sing 1.81 N N
4 C1 H1 C H sing 1.09 N N
5 C2 O2 C O sing 1.45 N N
6 C2 C3 C C sing 1.53 N N
7 C2 H2 C H sing 1.09 N N
8 C21 C2M C C sing 1.51 N N
9 C21 O21 C O doub 1.21 N N
10 C21 O2 C O sing 1.34 N N
11 C2M H2M2 C H sing 1.09 N N
12 C2M H2M3 C H sing 1.09 N N
13 C2M H2M1 C H sing 1.09 N N
14 C3 H3 C H sing 1.09 N N
15 C3 C4 C C sing 1.53 N N
16 C3 O3 C O sing 1.45 N N
17 C31 O3 C O sing 1.34 N N
18 C31 O31 C O doub 1.21 N N
19 C31 C3M C C sing 1.51 N N
20 C3M H3M2 C H sing 1.09 N N
21 C3M H3M1 C H sing 1.09 N N
22 C3M H3M3 C H sing 1.09 N N
23 C4 C5 C C sing 1.53 N N
24 C4 H4 C H sing 1.09 N N
25 C4 O4 C O sing 1.43 N N
26 C5 H5 C H sing 1.09 N N
27 C5 O5 C O sing 1.43 N N
28 C5 C6 C C sing 1.53 N N
29 C6 H62 C H sing 1.09 N N
30 C6 H61 C H sing 1.09 N N
31 C6 O6 C O sing 1.45 N N
32 C61 O61 C O doub 1.21 N N
33 C61 C6M C C sing 1.51 N N
34 C61 O6 C O sing 1.34 N N
35 C6M H6M2 C H sing 1.09 N N
36 C6M H6M3 C H sing 1.09 N N
37 C6M H6M1 C H sing 1.09 N N
38 N3S H2N3 N H sing 0.97 N N
39 N3S H1N3 N H sing 0.97 N N
40 N3S S1 N S sing 1.66 N N
41 O1S S1 O S doub 1.42 N N
42 O2S S1 O S doub 1.42 N N
43 O4 H4O O H sing 0.97 N N