Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : YNP    

Bonds between two atoms of the molecule

Total Number of Bonds: 92


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C25 C24 C C doub 1.38 N Y
2 C25 C26 C C sing 1.38 N Y
3 C24 C23 C C sing 1.38 N Y
4 C26 C27 C C doub 1.38 N Y
5 C23 C22 C C doub 1.38 N Y
6 C27 C22 C C sing 1.38 N Y
7 C22 C21 C C sing 1.51 N N
8 C17 C15 C C sing 1.53 N N
9 C16 C15 C C sing 1.53 N N
10 C21 O7 C O sing 1.43 N N
11 C21 C20 C C sing 1.53 N N
12 C15 C14 C C sing 1.53 N N
13 O7 C20 O C sing 1.43 N N
14 C20 C18 C C sing 1.53 N N
15 C14 C12 C C sing 1.53 N N
16 O4 C11 O C doub 1.21 N N
17 C12 C11 C C sing 1.51 N N
18 C12 O5 C O sing 1.45 N N
19 C11 O3 C O sing 1.34 N N
20 C18 C10 C C sing 1.53 N N
21 C18 C19 C C sing 1.53 N N
22 O3 C10 O C sing 1.45 N N
23 C10 C9 C C sing 1.53 N N
24 C49 C2 C C sing 1.53 N N
25 O5 C13 O C sing 1.34 N N
26 C13 C2 C C sing 1.51 N N
27 C13 O6 C O doub 1.21 N N
28 C2 C3 C C sing 1.53 N N
29 C9 C8 C C sing 1.51 N N
30 C3 N1 C N sing 1.48 N N
31 C8 C7 C C doub 1.33 E N
32 C7 C6 C C sing 1.47 N N
33 N1 C4 N C sing 1.37 N N
34 C6 N2 C N sing 1.36 N N
35 C6 O2 C O doub 1.22 N N
36 N2 C5 N C sing 1.48 N N
37 C4 C5 C C sing 1.51 N N
38 C4 O1 C O doub 1.21 N N
39 C5 C28 C C sing 1.53 N N
40 C34 C33 C C doub 1.38 N Y
41 C34 C29 C C sing 1.38 N Y
42 C28 C29 C C sing 1.51 N N
43 C33 C32 C C sing 1.39 N Y
44 C29 C30 C C doub 1.38 N Y
45 C32 O8 C O sing 1.36 N N
46 C32 C31 C C doub 1.39 N Y
47 C30 C31 C C sing 1.38 N Y
48 O8 C35 O C sing 1.43 N N
49 C31 CL1 C CL sing 1.74 N N
50 N1 H1 N H sing 0.97 N N
51 C2 H2 C H sing 1.09 N N
52 C5 H3 C H sing 1.09 N N
53 N2 H4 N H sing 0.97 N N
54 C7 H5 C H sing 1.08 N N
55 C8 H6 C H sing 1.08 N N
56 C10 H7 C H sing 1.09 N N
57 C12 H8 C H sing 1.09 N N
58 C14 H9 C H sing 1.09 N N
59 C14 H10 C H sing 1.09 N N
60 C15 H11 C H sing 1.09 N N
61 C16 H12 C H sing 1.09 N N
62 C16 H13 C H sing 1.09 N N
63 C16 H14 C H sing 1.09 N N
64 C17 H15 C H sing 1.09 N N
65 C17 H16 C H sing 1.09 N N
66 C17 H17 C H sing 1.09 N N
67 C18 H18 C H sing 1.09 N N
68 C19 H19 C H sing 1.09 N N
69 C19 H20 C H sing 1.09 N N
70 C19 H21 C H sing 1.09 N N
71 C20 H22 C H sing 1.09 N N
72 C21 H23 C H sing 1.09 N N
73 C23 H24 C H sing 1.08 N N
74 C24 H25 C H sing 1.08 N N
75 C25 H26 C H sing 1.08 N N
76 C26 H27 C H sing 1.08 N N
77 C27 H28 C H sing 1.08 N N
78 C28 H29 C H sing 1.09 N N
79 C28 H30 C H sing 1.09 N N
80 C3 H31 C H sing 1.09 N N
81 C3 H32 C H sing 1.09 N N
82 C30 H33 C H sing 1.08 N N
83 C33 H34 C H sing 1.08 N N
84 C34 H35 C H sing 1.08 N N
85 C35 H36 C H sing 1.09 N N
86 C35 H37 C H sing 1.09 N N
87 C35 H38 C H sing 1.09 N N
88 C49 H39 C H sing 1.09 N N
89 C49 H40 C H sing 1.09 N N
90 C49 H41 C H sing 1.09 N N
91 C9 H42 C H sing 1.09 N N
92 C9 H43 C H sing 1.09 N N