Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Y8M    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C07 C06 C C sing 1.53 N N
2 C07 C08 C C sing 1.53 N N
3 C06 C05 C C sing 1.51 N N
4 C14 C13 C C doub 1.38 N Y
5 C14 C09 C C sing 1.38 N Y
6 C15 C05 C C doub 1.38 N Y
7 C15 C16 C C sing 1.38 N Y
8 C13 C12 C C sing 1.38 N Y
9 C08 C09 C C sing 1.51 N N
10 C05 C04 C C sing 1.38 N Y
11 C16 C02 C C doub 1.39 N Y
12 C09 C10 C C doub 1.38 N Y
13 C12 C11 C C doub 1.38 N Y
14 C04 C03 C C doub 1.38 N Y
15 C02 C03 C C sing 1.39 N Y
16 C02 N01 C N sing 1.4 N N
17 C10 C11 C C sing 1.38 N Y
18 C10 H1 C H sing 1.08 N N
19 C13 H2 C H sing 1.08 N N
20 C15 H3 C H sing 1.08 N N
21 C03 H4 C H sing 1.08 N N
22 C04 H5 C H sing 1.08 N N
23 C06 H6 C H sing 1.09 N N
24 C06 H7 C H sing 1.09 N N
25 C07 H8 C H sing 1.09 N N
26 C07 H9 C H sing 1.09 N N
27 C08 H10 C H sing 1.09 N N
28 C08 H11 C H sing 1.09 N N
29 C11 H12 C H sing 1.08 N N
30 C12 H13 C H sing 1.08 N N
31 C14 H14 C H sing 1.08 N N
32 C16 H15 C H sing 1.08 N N
33 N01 H16 N H sing 0.97 N N
34 N01 H17 N H sing 0.97 N N