Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : WJT    

Bonds between two atoms of the molecule

Total Number of Bonds: 69


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3 C3 O C sing 1.43 N N
2 O2 C2 O C sing 1.43 N N
3 C3 C4 C C sing 1.53 N N
4 C3 C2 C C sing 1.53 N N
5 O4 C6 O C sing 1.43 N N
6 C4 N1 C N sing 1.47 N N
7 C2 C1 C C sing 1.53 N N
8 C1 O1 C O sing 1.43 N N
9 C1 C5 C C sing 1.53 N N
10 N1 C7 N C sing 1.47 N N
11 N1 C5 N C sing 1.47 N N
12 C7 C8 C C sing 1.51 N N
13 C5 C6 C C sing 1.53 N N
14 C8 C9 C C doub 1.38 N Y
15 C8 C25 C C sing 1.38 N Y
16 C9 C10 C C sing 1.38 N Y
17 O5 S1 O S doub 1.42 N N
18 O6 S1 O S doub 1.42 N N
19 C25 C24 C C doub 1.38 N Y
20 C10 C11 C C doub 1.38 N Y
21 S1 C16 S C sing 1.81 N N
22 S1 C15 S C sing 1.76 N N
23 C24 C11 C C sing 1.38 N Y
24 C11 C12 C C sing 1.51 N N
25 C15 C17 C C doub 1.38 N Y
26 C15 C14 C C sing 1.38 N Y
27 C17 C18 C C sing 1.39 N Y
28 C14 C13 C C doub 1.39 N Y
29 C12 N2 C N sing 1.47 N N
30 C13 C23 C C sing 1.39 N Y
31 C13 N2 C N sing 1.4 N N
32 C18 C23 C C doub 1.39 N Y
33 C18 C19 C C sing 1.48 N N
34 N4 C19 N C doub 1.33 N Y
35 N4 N3 N N sing 1.28 N Y
36 C19 C20 C C sing 1.4 N Y
37 N3 C22 N C doub 1.32 N Y
38 C20 C21 C C doub 1.39 N Y
39 C22 C21 C C sing 1.39 N Y
40 C4 H2 C H sing 1.09 N N
41 C4 H3 C H sing 1.09 N N
42 C5 H4 C H sing 1.09 N N
43 C6 H5 C H sing 1.09 N N
44 C6 H6 C H sing 1.09 N N
45 C7 H7 C H sing 1.09 N N
46 C7 H8 C H sing 1.09 N N
47 C10 H9 C H sing 1.08 N N
48 C17 H10 C H sing 1.08 N N
49 C20 H11 C H sing 1.08 N N
50 C21 H12 C H sing 1.08 N N
51 C22 H13 C H sing 1.08 N N
52 C24 H14 C H sing 1.08 N N
53 C1 H15 C H sing 1.09 N N
54 C12 H16 C H sing 1.09 N N
55 C12 H17 C H sing 1.09 N N
56 C14 H18 C H sing 1.08 N N
57 C16 H19 C H sing 1.09 N N
58 C16 H20 C H sing 1.09 N N
59 C16 H21 C H sing 1.09 N N
60 C2 H22 C H sing 1.09 N N
61 C23 H23 C H sing 1.08 N N
62 C25 H24 C H sing 1.08 N N
63 C3 H25 C H sing 1.09 N N
64 C9 H26 C H sing 1.08 N N
65 N2 H27 N H sing 0.97 N N
66 O1 H28 O H sing 0.97 N N
67 O2 H29 O H sing 0.97 N N
68 O3 H30 O H sing 0.97 N N
69 O4 H31 O H sing 0.97 N N