Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : WJT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 66


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 5.581 -0.549 0.003
2 N3 N N2 N Y N 0 -7.264 3.756 0.497
3 C4 C C1 N N N 0 5.437 0.406 -1.104
4 C5 C C2 R N N 0 6.961 -1.038 0.107
5 C6 C C3 N N N 0 7.056 -2.06 1.241
6 C7 C C4 N N N 0 4.636 -1.665 -0.139
7 C8 C C5 N Y N 0 3.225 -1.14 -0.079
8 C10 C C6 N Y N 0 1.288 -0.271 -1.185
9 C13 C C7 N Y N 0 -3.091 -0.541 -0.025
10 C15 C C8 N Y N 0 -5.343 -1.374 -0.122
11 C17 C C9 N Y N 0 -5.829 -0.091 0.033
12 C20 C C10 N Y N 0 -4.582 3.434 0.442
13 C21 C C11 N Y N 0 -5.121 4.702 0.595
14 C22 C C12 N Y N 0 -6.502 4.826 0.619
15 C24 C C13 N Y N 0 1.281 -0.559 1.192
16 C1 C C14 R N N 0 7.899 0.137 0.398
17 C11 C C15 N Y N 0 0.636 -0.177 0.03
18 C12 C C16 N N N 0 -0.778 0.342 0.089
19 C14 C C17 N Y N 0 -3.98 -1.602 -0.151
20 C16 C C18 N N N 0 -6.761 -2.866 -2.059
21 C18 C C19 N Y N 0 -4.945 0.98 0.154
22 C19 C C20 N Y N 0 -5.466 2.359 0.32
23 C2 C C21 R N N 0 7.785 1.166 -0.73
24 C23 C C22 N Y N 0 -3.572 0.751 0.13
25 C25 C C23 N Y N 0 2.575 -1.041 1.137
26 C3 C C24 S N N 0 6.329 1.623 -0.848
27 C9 C C25 N Y N 0 2.582 -0.752 -1.24
28 N2 N N3 N N N 0 -1.715 -0.776 -0.05
29 N4 N N4 N Y N 0 -6.775 2.578 0.354
30 O1 O O1 N N N 0 9.245 -0.336 0.479
31 O2 O O2 N N N 0 8.617 2.29 -0.435
32 O3 O O3 N N N 0 6.204 2.542 -1.935
33 O4 O O4 N N N 0 6.754 -1.422 2.484
34 O5 O O5 N N N 0 -5.727 -3.846 0.198
35 O6 O O6 N N N 0 -7.637 -2.285 0.394
36 S1 S S1 N N N 0 -6.463 -2.726 -0.275
37 H2 H H2 N N N 0 5.734 -0.073 -2.037
38 H3 H H3 N N N 0 4.397 0.726 -1.174
39 H4 H H4 N N N 0 7.251 -1.509 -0.832
40 H5 H H5 N N N 0 6.345 -2.866 1.064
41 H6 H H6 N N N 0 8.066 -2.468 1.279
42 H7 H H7 N N N 0 4.8 -2.16 -1.096
43 H8 H H8 N N N 0 4.793 -2.378 0.67
44 H9 H H9 N N N 0 0.784 0.028 -2.093
45 H10 H H10 N N N 0 -6.895 0.083 0.055
46 H11 H H11 N N N 0 -3.513 3.282 0.417
47 H12 H H12 N N N 0 -4.483 5.568 0.694
48 H13 H H13 N N N 0 -6.954 5.8 0.737
49 H14 H H14 N N N 0 0.771 -0.486 2.141
50 H15 H H15 N N N 0 7.619 0.6 1.344
51 H16 H H16 N N N 0 -0.943 0.838 1.045
52 H17 H H17 N N N 0 -0.938 1.053 -0.722
53 H18 H H18 N N N 0 -3.605 -2.608 -0.273
54 H19 H H19 N N N 0 -7.452 -3.688 -2.248
55 H20 H H20 N N N 0 -7.193 -1.936 -2.43
56 H21 H H21 N N N 0 -5.819 -3.059 -2.571
57 H22 H H22 N N N 0 8.103 0.714 -1.669
58 H23 H H23 N N N 0 -2.883 1.576 0.233
59 H24 H H24 N N N 0 3.079 -1.34 2.044
60 H25 H H25 N N N 0 6.023 2.11 0.078
61 H26 H H26 N N N 0 3.092 -0.825 -2.189
62 H27 H H27 N N N 0 -1.379 -1.68 -0.159
63 H28 H H28 N N N 0 9.895 0.356 0.662
64 H29 H H29 N N N 0 8.594 2.983 -1.109
65 H30 H H30 N N N 0 5.305 2.871 -2.071
66 H31 H H31 N N N 0 6.795 -2.012 3.249