Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : VJS    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O11 C09 O C doub 1.21 N N
2 O13 C12 O C doub 1.21 N N
3 C09 O10 C O sing 1.34 N N
4 C09 C08 C C sing 1.51 N N
5 O01 C02 O C doub 1.21 N N
6 C12 C08 C C sing 1.51 N N
7 C12 O14 C O sing 1.34 N N
8 C08 C07 C C sing 1.53 N N
9 C07 C06 C C sing 1.54 N N
10 C07 C03 C C sing 1.54 N N
11 C02 C03 C C sing 1.51 N N
12 C02 C15 C C sing 1.47 N N
13 C18 C19 C C doub 1.38 N Y
14 C18 C15 C C sing 1.4 N Y
15 C06 C05 C C sing 1.54 N N
16 C03 C04 C C sing 1.55 N N
17 C19 C20 C C sing 1.38 N Y
18 C15 C16 C C doub 1.4 N Y
19 C05 C04 C C sing 1.55 N N
20 C20 C21 C C sing 1.51 N N
21 C20 C17 C C doub 1.38 N Y
22 C16 C17 C C sing 1.38 N Y
23 C21 C22 C C sing 1.51 N N
24 O24 C22 O C doub 1.21 N N
25 C22 O23 C O sing 1.34 N N
26 C16 H1 C H sing 1.08 N N
27 C17 H2 C H sing 1.08 N N
28 C18 H3 C H sing 1.08 N N
29 C19 H4 C H sing 1.08 N N
30 C21 H5 C H sing 1.09 N N
31 C21 H6 C H sing 1.09 N N
32 C03 H7 C H sing 1.09 N N
33 C04 H8 C H sing 1.09 N N
34 C04 H9 C H sing 1.09 N N
35 C05 H10 C H sing 1.09 N N
36 C05 H11 C H sing 1.09 N N
37 C06 H12 C H sing 1.09 N N
38 C06 H13 C H sing 1.09 N N
39 C07 H14 C H sing 1.09 N N
40 C08 H15 C H sing 1.09 N N
41 O10 H16 O H sing 0.97 N N
42 O14 H17 O H sing 0.97 N N
43 O23 H18 O H sing 0.97 N N