Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VJS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C12 C C1 N N N 0 4.738 0.449 -0.252
2 C15 C C2 N Y N 0 -1.076 0.017 0.491
3 C16 C C3 N Y N 0 -1.905 0.671 1.408
4 C17 C C4 N Y N 0 -3.194 1.004 1.051
5 C18 C C5 N Y N 0 -1.562 -0.294 -0.783
6 C19 C C6 N Y N 0 -2.854 0.046 -1.125
7 C20 C C7 N Y N 0 -3.669 0.692 -0.212
8 C21 C C8 N N N 0 -5.08 1.059 -0.594
9 C22 C C9 N N N 0 -6.007 -0.075 -0.239
10 C02 C C10 N N N 0 0.304 -0.337 0.863
11 C03 C C11 R N N 0 1.194 -1.041 -0.129
12 C04 C C12 N N N 0 0.986 -2.574 -0.05
13 C05 C C13 N N N 0 2.316 -3.129 -0.618
14 C06 C C14 N N N 0 3.391 -2.169 -0.07
15 C07 C C15 R N N 0 2.678 -0.841 0.241
16 C08 C C16 N N N 0 3.28 0.287 -0.599
17 C09 C C17 N N N 0 2.549 1.573 -0.311
18 O01 O O1 N N N 0 0.724 -0.061 1.966
19 O10 O O2 N N N 0 1.231 1.663 -0.545
20 O11 O O3 N N N 0 3.15 2.523 0.131
21 O13 O O4 N N N 0 5.244 -0.268 0.578
22 O14 O O5 N N N 0 5.474 1.386 -0.869
23 O23 O O6 N N N 0 -7.321 0.029 -0.491
24 O24 O O7 N N N 0 -5.567 -1.078 0.271
25 H1 H H1 N N N 0 -1.536 0.914 2.394
26 H2 H H2 N N N 0 -3.836 1.509 1.758
27 H3 H H3 N N N 0 -0.928 -0.799 -1.496
28 H4 H H4 N N N 0 -3.232 -0.194 -2.108
29 H5 H H5 N N N 0 -5.381 1.957 -0.054
30 H6 H H6 N N N 0 -5.129 1.246 -1.666
31 H7 H H7 N N N 0 0.998 -0.681 -1.139
32 H8 H H8 N N N 0 0.845 -2.892 0.983
33 H9 H H9 N N N 0 0.141 -2.882 -0.666
34 H10 H H10 N N N 0 2.491 -4.143 -0.259
35 H11 H H11 N N N 0 2.303 -3.109 -1.708
36 H12 H H12 N N N 0 3.83 -2.579 0.839
37 H13 H H13 N N N 0 4.167 -2.01 -0.82
38 H14 H H14 N N N 0 2.77 -0.608 1.302
39 H15 H H15 N N N 0 3.183 0.043 -1.657
40 H16 H H16 N N N 0 0.805 2.508 -0.344
41 H17 H H17 N N N 0 6.405 1.452 -0.613
42 H18 H H18 N N N 0 -7.876 -0.724 -0.246