Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VGT    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O C O C sing 1.43 N N
2 C C1 C C sing 1.53 N N
3 C C8 C C sing 1.53 N N
4 C1 SE C SE sing 1.96 N N
5 C8 S C S sing 1.81 N N
6 S C9 S C sing 1.76 N N
7 C6 C7 C C doub 1.38 N Y
8 C6 C5 C C sing 1.38 N Y
9 C7 C2 C C sing 1.38 N Y
10 C5 C4 C C doub 1.38 N Y
11 C2 SE C SE sing 1.96 N N
12 C2 C3 C C doub 1.38 N Y
13 C9 C10 C C doub 1.39 N Y
14 C9 C14 C C sing 1.39 N Y
15 C10 C11 C C sing 1.38 N Y
16 C14 C13 C C doub 1.38 N Y
17 C4 C3 C C sing 1.38 N Y
18 C13 C12 C C sing 1.38 N Y
19 C11 C12 C C doub 1.38 N Y
20 C12 S1 C S sing 1.76 N N
21 N S1 N S sing 1.66 N N
22 O2 S1 O S doub 1.42 N N
23 S1 O1 S O doub 1.42 N N
24 C7 H1 C H sing 1.08 N N
25 C8 H2 C H sing 1.09 N N
26 C8 H3 C H sing 1.09 N N
27 C1 H4 C H sing 1.09 N N
28 C1 H5 C H sing 1.09 N N
29 C5 H6 C H sing 1.08 N N
30 C6 H7 C H sing 1.08 N N
31 C4 H8 C H sing 1.08 N N
32 C3 H9 C H sing 1.08 N N
33 N H10 N H sing 0.97 N N
34 N H11 N H sing 0.97 N N
35 C11 H12 C H sing 1.08 N N
36 C10 H13 C H sing 1.08 N N
37 C13 H14 C H sing 1.08 N N
38 C14 H15 C H sing 1.08 N N
39 C H16 C H sing 1.09 N N
40 O H17 O H sing 0.97 N N