Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : VAO    

Bonds between two atoms of the molecule

Total Number of Bonds: 27


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C N C trip 1.14 N N
2 C C1 C C sing 1.43 N N
3 C1 C6 C C sing 1.4 N Y
4 C1 C2 C C doub 1.4 N Y
5 C6 C5 C C doub 1.39 N Y
6 C5 C4 C C sing 1.4 N Y
7 C5 C7 C C sing 1.48 N N
8 C4 O2 C O sing 1.36 N N
9 C4 C3 C C doub 1.39 N Y
10 C3 C2 C C sing 1.38 N Y
11 C7 N C N doub 1.33 N Y
12 C7 C8 C C sing 1.39 N Y
13 N C11 N C sing 1.32 N Y
14 C11 C10 C C doub 1.38 N Y
15 C10 C9 C C sing 1.4 N Y
16 C9 C8 C C doub 1.4 N Y
17 C9 C12 C C sing 1.48 N N
18 C12 O1 C O doub 1.21 N N
19 C12 O C O sing 1.35 N N
20 C6 H6 C H sing 1.08 N N
21 C2 H2 C H sing 1.08 N N
22 C3 H3 C H sing 1.08 N N
23 C8 H8 C H sing 1.08 N N
24 C11 H11 C H sing 1.08 N N
25 C10 H10 C H sing 1.08 N N
26 O H O H sing 0.97 N N
27 O2 H21 O H sing 0.97 N N