Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : V6W    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 CA CB C C sing 1.53 N N
3 CA C C C sing 1.51 N N
4 CB CG C C sing 1.51 N N
5 CE3 CZ3 C C doub 1.37 N Y
6 CE3 CD2 C C sing 1.4 N Y
7 CZ3 CH2 C C sing 1.39 N Y
8 C O C O doub 1.21 N N
9 CD2 CG C C sing 1.47 N Y
10 CD2 CE2 C C doub 1.41 N Y
11 CG CD1 C C doub 1.34 N Y
12 CH2 CZ2 C C doub 1.38 N Y
13 CE2 CZ2 C C sing 1.39 N Y
14 CE2 NE1 C N sing 1.38 N Y
15 CD1 NE1 C N sing 1.37 N Y
16 NE1 C24 N C sing 1.46 N N
17 C24 C25 C C sing 1.51 N N
18 O26 C25 O C doub 1.21 N N
19 C25 O27 C O sing 1.34 N N
20 CA HA C H sing 1.09 N N
21 CB HB2 C H sing 1.09 N N
22 CB HB3 C H sing 1.09 N N
23 CD1 HD1 C H sing 1.08 N N
24 C24 H6 C H sing 1.09 N N
25 C24 H7 C H sing 1.09 N N
26 O27 H8 O H sing 0.97 N N
27 CE3 HE3 C H sing 1.08 N N
28 CZ3 HZ3 C H sing 1.08 N N
29 CH2 HH2 C H sing 1.08 N N
30 CZ2 HZ2 C H sing 1.08 N N
31 N H N H sing 1.01 N N
32 N H2 N H sing 1.01 N N
33 OXT C O C sing 1.34 N N
34 OXT HXT O H sing 0.97 N N