Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : TYO    

Bonds between two atoms of the molecule

Total Number of Bonds: 27


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 N H N H sing 1.01 N N
3 N H2 N H sing 1.01 N N
4 CA C C C sing 1.51 N N
5 CA CB C C sing 1.53 N N
6 CA HA C H sing 1.09 N N
7 CB CG C C sing 1.51 N N
8 CB HB1 C H sing 1.09 N N
9 CB HB2 C H sing 1.09 N N
10 CG CD2 C C doub 1.35 Z N
11 CG CD1 C C sing 1.46 N N
12 CD1 CE1 C C doub 1.34 E N
13 CD1 HD1 C H sing 1.08 N N
14 CE1 OE1 C O sing 1.36 N N
15 CE1 HE1 C H sing 1.08 N N
16 OE1 HOE1 O H sing 0.97 N N
17 CD2 CE2 C C sing 1.46 N N
18 CD2 HD21 C H sing 1.08 N N
19 CE2 CZ C C doub 1.34 E N
20 CE2 HE2 C H sing 1.08 N N
21 CZ OH C O sing 1.35 N N
22 CZ HZ C H sing 1.08 N N
23 OH OH1 O O sing 1.47 N N
24 OH1 HOH1 O H sing 0.97 N N
25 C O C O doub 1.21 N N
26 C OXT C O sing 1.34 N N
27 OXT HXT O H sing 0.97 N N