Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : SQB    

Bonds between two atoms of the molecule

Total Number of Bonds: 68


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C17 C16 C C sing 1.51 N N
2 C15 C16 C C doub 1.38 N Y
3 C15 C14 C C sing 1.39 N Y
4 C16 N3 C N sing 1.32 N Y
5 C14 C12 C C doub 1.39 N Y
6 N3 C11 N C doub 1.33 N Y
7 C12 C11 C C sing 1.4 N Y
8 C12 O C O sing 1.36 N N
9 C11 C10 C C sing 1.48 N N
10 C13 O C O sing 1.43 N N
11 C10 C9 C C doub 1.39 N Y
12 C10 C18 C C sing 1.4 N Y
13 C9 C8 C C sing 1.38 N Y
14 C18 C19 C C doub 1.38 N Y
15 C8 CL C CL sing 1.74 N N
16 C8 C7 C C doub 1.4 N Y
17 C19 C7 C C sing 1.4 N Y
18 C7 C6 C C sing 1.48 N N
19 O1 C20 O C doub 1.22 N N
20 C6 C20 C C sing 1.46 N N
21 C6 C5 C C doub 1.37 N N
22 C20 N4 C N sing 1.35 N N
23 C25 O3 C O sing 1.43 N N
24 C25 C24 C C sing 1.53 N N
25 N5 C24 N C sing 1.47 N N
26 O3 C22 O C sing 1.43 N N
27 C5 C4 C C sing 1.41 N N
28 C22 C21 C C sing 1.53 N N
29 C22 O2 C O sing 1.43 N N
30 N4 C21 N C sing 1.46 N N
31 N4 C3 N C sing 1.37 N N
32 C24 C23 C C sing 1.53 N N
33 C23 O2 C O sing 1.43 N N
34 C4 C3 C C doub 1.41 N Y
35 C4 C2 C C sing 1.4 N Y
36 C3 N2 C N sing 1.33 N Y
37 C2 N1 C N doub 1.32 N Y
38 N2 C1 N C doub 1.32 N Y
39 C1 N1 C N sing 1.33 N Y
40 C1 N C N sing 1.38 N N
41 N C N C sing 1.47 N N
42 C9 H1 C H sing 1.08 N N
43 C2 H2 C H sing 1.08 N N
44 C5 H3 C H sing 1.08 N N
45 N H4 N H sing 0.97 N N
46 C H5 C H sing 1.09 N N
47 C H6 C H sing 1.09 N N
48 C H7 C H sing 1.09 N N
49 C13 H8 C H sing 1.09 N N
50 C13 H9 C H sing 1.09 N N
51 C13 H10 C H sing 1.09 N N
52 C14 H11 C H sing 1.08 N N
53 C15 H12 C H sing 1.08 N N
54 C17 H13 C H sing 1.09 N N
55 C17 H14 C H sing 1.09 N N
56 C17 H15 C H sing 1.09 N N
57 C18 H16 C H sing 1.08 N N
58 C19 H17 C H sing 1.08 N N
59 C21 H18 C H sing 1.09 N N
60 C21 H19 C H sing 1.09 N N
61 C22 H20 C H sing 1.09 N N
62 C23 H21 C H sing 1.09 N N
63 C23 H22 C H sing 1.09 N N
64 C24 H23 C H sing 1.09 N N
65 C25 H24 C H sing 1.09 N N
66 C25 H25 C H sing 1.09 N N
67 N5 H26 N H sing 1.01 N N
68 N5 H27 N H sing 1.01 N N