data_SQB
#
_chem_comp.id SQB
_chem_comp.name
8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-methoxy-6-methyl-pyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H27 Cl N6 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-11-30
_chem_comp.pdbx_modified_date 2020-12-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 522.983
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code SQB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7B35
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SQB C7 C1 C 0 1 Y N N N N N 13.094 29.950 14.715 1.057 0.525 -0.014 C7 SQB 1
SQB C8 C2 C 0 1 Y N N N N N 12.215 30.666 13.908 1.911 1.541 -0.449 C8 SQB 2
SQB C9 C3 C 0 1 Y N N N N N 11.884 30.232 12.638 3.276 1.351 -0.424 C9 SQB 3
SQB C10 C4 C 0 1 Y N N N N N 12.424 29.051 12.138 3.803 0.144 0.035 C10 SQB 4
SQB C11 C5 C 0 1 Y N N N N N 12.107 28.588 10.755 5.271 -0.060 0.062 C11 SQB 5
SQB C12 C6 C 0 1 Y N N N N N 10.872 28.056 10.382 5.848 -0.814 1.089 C12 SQB 6
SQB O1 O1 O 0 1 N N N N N N 15.685 31.100 15.181 -0.698 -0.633 -1.903 O1 SQB 7
SQB C1 C7 C 0 1 Y N N N N N 14.386 31.557 20.753 -5.076 2.010 0.728 C1 SQB 8
SQB C2 C8 C 0 1 Y N N N N N 12.520 30.976 19.588 -3.084 2.496 1.786 C2 SQB 9
SQB C3 C9 C 0 1 Y N N N N N 14.641 31.110 18.542 -3.175 1.061 -0.160 C3 SQB 10
SQB C4 C10 C 0 1 Y N N N N N 13.266 30.852 18.412 -2.415 1.701 0.842 C4 SQB 11
SQB C5 C11 C 0 1 N N N N N N 12.770 30.489 17.120 -1.014 1.526 0.894 C5 SQB 12
SQB C6 C12 C 0 1 N N N N N N 13.568 30.452 16.029 -0.409 0.728 -0.041 C6 SQB 13
SQB O2 O2 O 0 1 N N N N N N 17.591 29.082 18.206 -4.617 -1.587 -0.463 O2 SQB 14
SQB O3 O3 O 0 1 N N N N N N 19.058 30.363 17.021 -2.687 -2.559 -1.345 O3 SQB 15
SQB N N1 N 0 1 N N N N N N 14.933 31.939 21.912 -6.446 2.174 0.676 N SQB 16
SQB C C13 C 0 1 N N N N N N 16.360 32.025 22.133 -7.122 3.009 1.673 C SQB 17
SQB O O4 O 0 1 N N N N N N 9.905 27.994 11.346 5.075 -1.360 2.063 O SQB 18
SQB C13 C14 C 0 1 N N N N N N 8.646 27.435 10.983 5.743 -2.116 3.076 C13 SQB 19
SQB C14 C15 C 0 1 Y N N N N N 10.697 27.625 9.076 7.226 -0.996 1.097 C14 SQB 20
SQB C15 C16 C 0 1 Y N N N N N 11.753 27.742 8.193 7.974 -0.419 0.082 C15 SQB 21
SQB C16 C17 C 0 1 Y N N N N N 12.956 28.284 8.627 7.335 0.313 -0.901 C16 SQB 22
SQB C17 C18 C 0 1 N N N N N N 14.125 28.436 7.709 8.148 0.940 -2.005 C17 SQB 23
SQB C18 C19 C 0 1 Y N N N N N 13.284 28.321 12.947 2.950 -0.871 0.470 C18 SQB 24
SQB C19 C20 C 0 1 Y N N N N N 13.614 28.758 14.215 1.586 -0.684 0.440 C19 SQB 25
SQB C20 C21 C 0 1 N N N N N N 14.960 30.878 16.144 -1.227 0.079 -1.068 C20 SQB 26
SQB C21 C22 C 0 1 N N N N N N 16.899 31.274 17.558 -3.362 -0.378 -2.138 C21 SQB 27
SQB C22 C23 C 0 1 N N N N N N 17.697 30.041 17.178 -3.827 -1.749 -1.643 C22 SQB 28
SQB C23 C24 C 0 1 N N N N N N 18.218 27.847 17.839 -5.079 -2.820 0.096 C23 SQB 29
SQB C24 C25 C 0 1 N N N N N N 19.678 28.058 17.489 -3.869 -3.704 0.419 C24 SQB 30
SQB C25 C26 C 0 1 N N N N N N 19.812 29.240 16.549 -3.018 -3.859 -0.846 C25 SQB 31
SQB N1 N2 N 0 1 Y N N N N N 13.062 31.329 20.759 -4.394 2.621 1.692 N1 SQB 32
SQB N2 N3 N 0 1 Y N N N N N 15.214 31.458 19.700 -4.490 1.247 -0.181 N2 SQB 33
SQB N3 N4 N 0 1 Y N N N N N 13.126 28.700 9.891 6.027 0.468 -0.891 N3 SQB 34
SQB N4 N5 N 0 1 N N N N N N 15.454 31.058 17.421 -2.560 0.271 -1.099 N4 SQB 35
SQB N5 N6 N 0 1 N N N N N N 20.278 26.844 16.927 -4.330 -5.024 0.870 N5 SQB 36
SQB CL CL1 CL 0 0 N N N N N N 11.496 32.139 14.475 1.254 3.043 -1.020 CL SQB 37
SQB H1 H1 H 0 1 N N N N N N 11.204 30.812 12.032 3.937 2.136 -0.760 H1 SQB 38
SQB H2 H2 H 0 1 N N N N N N 11.459 30.778 19.549 -2.538 2.996 2.573 H2 SQB 39
SQB H3 H3 H 0 1 N N N N N N 11.725 30.237 17.013 -0.428 2.014 1.659 H3 SQB 40
SQB H4 H4 H 0 1 N N N N N N 14.573 32.854 22.096 -6.960 1.737 -0.020 H4 SQB 41
SQB H5 H5 H 0 1 N N N N N N 16.553 32.361 23.162 -8.193 3.018 1.472 H5 SQB 42
SQB H6 H6 H 0 1 N N N N N N 16.815 31.035 21.980 -6.943 2.603 2.668 H6 SQB 43
SQB H7 H7 H 0 1 N N N N N N 16.798 32.744 21.425 -6.733 4.025 1.619 H7 SQB 44
SQB H8 H8 H 0 1 N N N N N N 7.973 27.451 11.853 5.011 -2.495 3.789 H8 SQB 45
SQB H9 H9 H 0 1 N N N N N N 8.204 28.026 10.167 6.270 -2.952 2.616 H9 SQB 46
SQB H10 H10 H 0 1 N N N N N N 8.789 26.397 10.648 6.458 -1.476 3.593 H10 SQB 47
SQB H11 H11 H 0 1 N N N N N N 9.754 27.206 8.755 7.702 -1.572 1.877 H11 SQB 48
SQB H12 H12 H 0 1 N N N N N N 11.644 27.414 7.170 9.047 -0.538 0.062 H12 SQB 49
SQB H13 H13 H 0 1 N N N N N N 14.966 28.886 8.257 8.235 0.239 -2.835 H13 SQB 50
SQB H14 H14 H 0 1 N N N N N N 14.423 27.448 7.328 7.654 1.850 -2.348 H14 SQB 51
SQB H15 H15 H 0 1 N N N N N N 13.847 29.086 6.866 9.142 1.185 -1.631 H15 SQB 52
SQB H16 H16 H 0 1 N N N N N N 13.702 27.396 12.579 3.359 -1.805 0.826 H16 SQB 53
SQB H17 H17 H 0 1 N N N N N N 14.282 28.169 14.826 0.926 -1.470 0.777 H17 SQB 54
SQB H18 H18 H 0 1 N N N N N N 17.122 31.533 18.604 -2.760 -0.502 -3.038 H18 SQB 55
SQB H19 H19 H 0 1 N N N N N N 17.197 32.106 16.903 -4.231 0.240 -2.365 H19 SQB 56
SQB H20 H20 H 0 1 N N N N N N 17.292 29.636 16.239 -4.424 -2.232 -2.417 H20 SQB 57
SQB H21 H21 H 0 1 N N N N N N 17.697 27.425 16.967 -5.639 -2.620 1.010 H21 SQB 58
SQB H22 H22 H 0 1 N N N N N N 18.149 27.145 18.683 -5.723 -3.328 -0.622 H22 SQB 59
SQB H23 H23 H 0 1 N N N N N N 20.211 28.308 18.418 -3.275 -3.237 1.204 H23 SQB 60
SQB H24 H24 H 0 1 N N N N N N 19.442 28.951 15.554 -3.582 -4.407 -1.601 H24 SQB 61
SQB H25 H25 H 0 1 N N N N N N 20.872 29.524 16.478 -2.103 -4.401 -0.606 H25 SQB 62
SQB H26 H26 H 0 1 N N N N N N 20.170 26.089 17.573 -3.549 -5.624 1.089 H26 SQB 63
SQB H27 H27 H 0 1 N N N N N N 19.822 26.614 16.067 -4.953 -4.939 1.659 H27 SQB 64
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SQB C17 C16 SING N N 1
SQB C15 C16 DOUB Y N 2
SQB C15 C14 SING Y N 3
SQB C16 N3 SING Y N 4
SQB C14 C12 DOUB Y N 5
SQB N3 C11 DOUB Y N 6
SQB C12 C11 SING Y N 7
SQB C12 O SING N N 8
SQB C11 C10 SING N N 9
SQB C13 O SING N N 10
SQB C10 C9 DOUB Y N 11
SQB C10 C18 SING Y N 12
SQB C9 C8 SING Y N 13
SQB C18 C19 DOUB Y N 14
SQB C8 CL SING N N 15
SQB C8 C7 DOUB Y N 16
SQB C19 C7 SING Y N 17
SQB C7 C6 SING N N 18
SQB O1 C20 DOUB N N 19
SQB C6 C20 SING N N 20
SQB C6 C5 DOUB N N 21
SQB C20 N4 SING N N 22
SQB C25 O3 SING N N 23
SQB C25 C24 SING N N 24
SQB N5 C24 SING N N 25
SQB O3 C22 SING N N 26
SQB C5 C4 SING N N 27
SQB C22 C21 SING N N 28
SQB C22 O2 SING N N 29
SQB N4 C21 SING N N 30
SQB N4 C3 SING N N 31
SQB C24 C23 SING N N 32
SQB C23 O2 SING N N 33
SQB C4 C3 DOUB Y N 34
SQB C4 C2 SING Y N 35
SQB C3 N2 SING Y N 36
SQB C2 N1 DOUB Y N 37
SQB N2 C1 DOUB Y N 38
SQB C1 N1 SING Y N 39
SQB C1 N SING N N 40
SQB N C SING N N 41
SQB C9 H1 SING N N 42
SQB C2 H2 SING N N 43
SQB C5 H3 SING N N 44
SQB N H4 SING N N 45
SQB C H5 SING N N 46
SQB C H6 SING N N 47
SQB C H7 SING N N 48
SQB C13 H8 SING N N 49
SQB C13 H9 SING N N 50
SQB C13 H10 SING N N 51
SQB C14 H11 SING N N 52
SQB C15 H12 SING N N 53
SQB C17 H13 SING N N 54
SQB C17 H14 SING N N 55
SQB C17 H15 SING N N 56
SQB C18 H16 SING N N 57
SQB C19 H17 SING N N 58
SQB C21 H18 SING N N 59
SQB C21 H19 SING N N 60
SQB C22 H20 SING N N 61
SQB C23 H21 SING N N 62
SQB C23 H22 SING N N 63
SQB C24 H23 SING N N 64
SQB C25 H24 SING N N 65
SQB C25 H25 SING N N 66
SQB N5 H26 SING N N 67
SQB N5 H27 SING N N 68
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SQB InChI InChI 1.03 InChI=1S/C26H27ClN6O4/c1-14-4-7-21(35-3)23(31-14)15-5-6-18(20(27)9-15)19-8-16-10-30-26(29-2)32-24(16)33(25(19)34)11-22-36-12-17(28)13-37-22/h4-10,17,22H,11-13,28H2,1-3H3,(H,29,30,32)/t17-,22-
SQB InChIKey InChI 1.03 SPYPSRDGJWPJCB-VVOJOOEHSA-N
SQB SMILES_CANONICAL CACTVS 3.385 CNc1ncc2C=C(C(=O)N(C[C@@H]3OC[C@@H](N)CO3)c2n1)c4ccc(cc4Cl)c5nc(C)ccc5OC
SQB SMILES CACTVS 3.385 CNc1ncc2C=C(C(=O)N(C[CH]3OC[CH](N)CO3)c2n1)c4ccc(cc4Cl)c5nc(C)ccc5OC
SQB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1ccc(c(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CC5OCC(CO5)N)NC)OC
SQB SMILES "OpenEye OEToolkits" 2.0.7 Cc1ccc(c(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CC5OCC(CO5)N)NC)OC
#
_pdbx_chem_comp_identifier.comp_id SQB
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-methoxy-6-methyl-pyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SQB 'Create component' 2020-11-30 PDBE
SQB 'Initial release' 2020-12-16 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
SQB C7 C 1.158 -1.116 1
SQB C8 C 1.156 -2.616 2
SQB C9 C 2.455 -3.367 3
SQB C10 C 3.754 -2.618 4
SQB C11 C 5.053 -3.369 5
SQB C12 C 6.352 -2.620 6
SQB O1 O 1.160 1.884 7
SQB C1 C -5.336 1.139 8
SQB C2 C -4.038 -1.112 9
SQB C3 C -2.738 1.137 10
SQB C4 C -2.739 -0.363 11
SQB C5 C -1.440 -1.114 12
SQB C6 C -0.141 -0.365 13
SQB O2 O -2.734 5.637 14
SQB O3 O -4.035 3.388 15
SQB N N -6.634 1.890 16
SQB C C -7.934 1.142 17
SQB O O 6.354 -1.120 18
SQB C13 C 7.653 -0.371 19
SQB C14 C 7.651 -3.371 20
SQB C15 C 7.650 -4.871 21
SQB C16 C 6.350 -5.620 22
SQB C17 C 6.349 -7.120 23
SQB C18 C 3.756 -1.118 24
SQB C19 C 2.457 -0.367 25
SQB C20 C -0.140 1.135 26
SQB C21 C -1.437 3.386 27
SQB C22 C -2.735 4.137 28
SQB C23 C -4.032 6.388 29
SQB C24 C -5.332 5.639 30
SQB C25 C -5.333 4.139 31
SQB N1 N -5.337 -0.361 32
SQB N2 N -4.036 1.888 33
SQB N3 N 5.052 -4.869 34
SQB N4 N -1.438 1.886 35
SQB N5 N -6.630 6.390 36
SQB CL Cl -0.143 -3.365 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
SQB C17 C16 SINGLE NONE 1
SQB C15 C16 DOUBLE NONE 2
SQB C15 C14 SINGLE NONE 3
SQB C16 N3 SINGLE NONE 4
SQB C14 C12 DOUBLE NONE 5
SQB N3 C11 DOUBLE NONE 6
SQB C12 C11 SINGLE NONE 7
SQB C12 O SINGLE NONE 8
SQB C11 C10 SINGLE NONE 9
SQB C13 O SINGLE NONE 10
SQB C10 C9 SINGLE NONE 11
SQB C10 C18 DOUBLE NONE 12
SQB C9 C8 DOUBLE NONE 13
SQB C18 C19 SINGLE NONE 14
SQB C8 CL SINGLE NONE 15
SQB C8 C7 SINGLE NONE 16
SQB C19 C7 DOUBLE NONE 17
SQB C7 C6 SINGLE NONE 18
SQB O1 C20 DOUBLE NONE 19
SQB C6 C20 SINGLE NONE 20
SQB C6 C5 DOUBLE NONE 21
SQB C20 N4 SINGLE NONE 22
SQB C25 O3 SINGLE NONE 23
SQB C25 C24 SINGLE NONE 24
SQB C24 N5 SINGLE BEGINDASH 25
SQB O3 C22 SINGLE NONE 26
SQB C5 C4 SINGLE NONE 27
SQB C22 C21 SINGLE BEGINWEDGE 28
SQB C22 O2 SINGLE NONE 29
SQB N4 C21 SINGLE NONE 30
SQB N4 C3 SINGLE NONE 31
SQB C24 C23 SINGLE NONE 32
SQB C23 O2 SINGLE NONE 33
SQB C4 C3 DOUBLE NONE 34
SQB C4 C2 SINGLE NONE 35
SQB C3 N2 SINGLE NONE 36
SQB C2 N1 DOUBLE NONE 37
SQB N2 C1 DOUBLE NONE 38
SQB C1 N1 SINGLE NONE 39
SQB C1 N SINGLE NONE 40
SQB N C SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
SQB MurckoScaffold S1 scaffold O=c1c(-c2ccc(-c3ccccn3)cc2)cc2cncnc2n1CC1OCCCO1 InChI=1S/C23H20N4O3/c28-23-19(16-5-7-17(8-6-16)20-4-1-2-9-25-20)12-18-13-24-15-26-22(18)27(23)14-21-29-10-3-11-30-21/h1-2,4-9,12-13,15,21H,3,10-11,14H2 OMVLZSLEXBGGAH-UHFFFAOYSA-N
SQB phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
SQB pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
SQB pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
SQB Z54628578 F4 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
SQB C7 S1 1
SQB C8 S1 1
SQB C9 S1 1
SQB C10 S1 1
SQB C11 S1 1
SQB C12 S1 1
SQB O1 S1 1
SQB C1 S1 1
SQB C2 S1 1
SQB C3 S1 1
SQB C4 S1 1
SQB C5 S1 1
SQB C6 S1 1
SQB O2 S1 1
SQB O3 S1 1
SQB C14 S1 1
SQB C15 S1 1
SQB C16 S1 1
SQB C18 S1 1
SQB C19 S1 1
SQB C20 S1 1
SQB C21 S1 1
SQB C22 S1 1
SQB C23 S1 1
SQB C24 S1 1
SQB C25 S1 1
SQB N1 S1 1
SQB N2 S1 1
SQB N3 S1 1
SQB N4 S1 1
SQB C7 F1 1
SQB C8 F1 1
SQB C9 F1 1
SQB C10 F1 1
SQB C18 F1 1
SQB C19 F1 1
SQB C11 F2 1
SQB C12 F2 1
SQB C14 F2 1
SQB C15 F2 1
SQB C16 F2 1
SQB N3 F2 1
SQB C3 F2 2
SQB C4 F2 2
SQB C5 F2 2
SQB C6 F2 2
SQB C20 F2 2
SQB N4 F2 2
SQB C4 F3 1
SQB C3 F3 1
SQB N2 F3 1
SQB C1 F3 1
SQB N1 F3 1
SQB C2 F3 1
SQB C F4 1
SQB N F4 1
SQB C1 F4 1
SQB N2 F4 1
SQB C3 F4 1
SQB C4 F4 1
SQB C2 F4 1
SQB N1 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id SQB
_pdbe_chem_comp_rdkit_properties.exactmw 522.178
_pdbe_chem_comp_rdkit_properties.amw 522.993
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 64
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.308
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 256.033
_pdbe_chem_comp_rdkit_properties.tpsa 126.410
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.047
_pdbe_chem_comp_rdkit_properties.CrippenMR 135.536
_pdbe_chem_comp_rdkit_properties.chi0v 18.450
_pdbe_chem_comp_rdkit_properties.chi1v 9.929
_pdbe_chem_comp_rdkit_properties.chi2v 4.732
_pdbe_chem_comp_rdkit_properties.chi3v 4.732
_pdbe_chem_comp_rdkit_properties.chi4v 3.174
_pdbe_chem_comp_rdkit_properties.chi0n 44.694
_pdbe_chem_comp_rdkit_properties.chi1n 22.893
_pdbe_chem_comp_rdkit_properties.chi2n 4.449
_pdbe_chem_comp_rdkit_properties.chi3n 4.449
_pdbe_chem_comp_rdkit_properties.chi4n 2.938
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.570
_pdbe_chem_comp_rdkit_properties.kappa1 8.469
_pdbe_chem_comp_rdkit_properties.kappa2 10.427
_pdbe_chem_comp_rdkit_properties.kappa3 5.009
_pdbe_chem_comp_rdkit_properties.Phi 2.387
#
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
SQB C7 1.480 -0.667 -0.088 ETKDGv3 1
SQB C8 2.331 0.227 -0.923 ETKDGv3 2
SQB C9 3.556 0.570 -0.501 ETKDGv3 3
SQB C10 4.075 0.079 0.800 ETKDGv3 4
SQB C11 5.443 0.451 1.226 ETKDGv3 5
SQB C12 5.755 0.824 2.636 ETKDGv3 6
SQB O1 -0.950 -0.125 1.349 ETKDGv3 7
SQB C1 -3.853 -2.979 -3.069 ETKDGv3 8
SQB C2 -1.501 -2.893 -3.444 ETKDGv3 9
SQB C3 -2.457 -1.932 -1.430 ETKDGv3 10
SQB C4 -1.351 -2.182 -2.158 ETKDGv3 11
SQB C5 -0.018 -1.753 -1.690 ETKDGv3 12
SQB C6 0.132 -1.082 -0.538 ETKDGv3 13
SQB O2 -3.339 1.441 0.216 ETKDGv3 14
SQB O3 -5.427 0.584 0.792 ETKDGv3 15
SQB N -5.139 -3.386 -3.548 ETKDGv3 16
SQB C -6.364 -3.115 -2.806 ETKDGv3 17
SQB O 4.715 0.877 3.580 ETKDGv3 18
SQB C13 4.877 1.219 4.953 ETKDGv3 19
SQB C14 7.028 1.126 2.954 ETKDGv3 20
SQB C15 8.076 1.116 1.918 ETKDGv3 21
SQB C16 7.751 0.814 0.655 ETKDGv3 22
SQB C17 8.793 0.798 -0.418 ETKDGv3 23
SQB C18 3.305 -0.732 1.547 ETKDGv3 24
SQB C19 1.953 -1.110 1.090 ETKDGv3 25
SQB C20 -1.065 -0.784 0.279 ETKDGv3 26
SQB C21 -3.574 -0.917 0.597 ETKDGv3 27
SQB C22 -4.236 0.353 0.058 ETKDGv3 28
SQB C23 -3.889 2.597 -0.381 ETKDGv3 29
SQB C24 -5.237 2.942 0.259 ETKDGv3 30
SQB C25 -6.119 1.684 0.236 ETKDGv3 31
SQB N1 -2.680 -3.256 -3.852 ETKDGv3 32
SQB N2 -3.738 -2.358 -1.930 ETKDGv3 33
SQB N3 6.392 0.473 0.332 ETKDGv3 34
SQB N4 -2.360 -1.237 -0.168 ETKDGv3 35
SQB N5 -5.871 4.057 -0.448 ETKDGv3 36
SQB CL 1.737 0.902 -2.436 ETKDGv3 37
SQB H1 4.166 1.232 -1.104 ETKDGv3 38
SQB H2 -0.633 -3.112 -4.052 ETKDGv3 39
SQB H3 0.850 -1.994 -2.292 ETKDGv3 40
SQB H4 -5.202 -3.888 -4.463 ETKDGv3 41
SQB H5 -6.489 -2.019 -2.672 ETKDGv3 42
SQB H6 -6.320 -3.608 -1.812 ETKDGv3 43
SQB H7 -7.239 -3.510 -3.365 ETKDGv3 44
SQB H8 5.275 2.251 5.046 ETKDGv3 45
SQB H9 3.890 1.172 5.457 ETKDGv3 46
SQB H10 5.562 0.498 5.448 ETKDGv3 47
SQB H11 7.309 1.402 3.961 ETKDGv3 48
SQB H12 9.096 1.365 2.186 ETKDGv3 49
SQB H13 8.324 0.609 -1.407 ETKDGv3 50
SQB H14 9.316 1.777 -0.454 ETKDGv3 51
SQB H15 9.531 -0.006 -0.213 ETKDGv3 52
SQB H16 3.670 -1.149 2.476 ETKDGv3 53
SQB H17 1.360 -1.771 1.710 ETKDGv3 54
SQB H18 -4.292 -1.764 0.538 ETKDGv3 55
SQB H19 -3.336 -0.787 1.676 ETKDGv3 56
SQB H20 -4.464 0.173 -1.021 ETKDGv3 57
SQB H21 -3.187 3.443 -0.222 ETKDGv3 58
SQB H22 -3.991 2.455 -1.482 ETKDGv3 59
SQB H23 -5.061 3.237 1.317 ETKDGv3 60
SQB H24 -7.030 1.870 0.844 ETKDGv3 61
SQB H25 -6.456 1.446 -0.799 ETKDGv3 62
SQB H26 -6.763 4.295 0.043 ETKDGv3 63
SQB H27 -6.121 3.758 -1.419 ETKDGv3 64
#