Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : SEP    

Bonds between two atoms of the molecule

Total Number of Bonds: 18


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 N H N H sing 1.01 N N
3 N H2 N H sing 1.01 N N
4 CA CB C C sing 1.53 N N
5 CA C C C sing 1.51 N N
6 CA HA C H sing 1.09 N N
7 CB OG C O sing 1.43 N N
8 CB HB2 C H sing 1.09 N N
9 CB HB3 C H sing 1.09 N N
10 OG P O P sing 1.61 N N
11 C O C O doub 1.21 N N
12 C OXT C O sing 1.34 N N
13 OXT HXT O H sing 0.97 N N
14 P O1P P O doub 1.48 N N
15 P O2P P O sing 1.61 N N
16 P O3P P O sing 1.61 N N
17 O2P HOP2 O H sing 0.97 N N
18 O3P HOP3 O H sing 0.97 N N