Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : S38    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.4 N Y
2 C1 C6 C C sing 1.38 N Y
3 C2 C3 C C sing 1.4 N Y
4 C2 C19 C C sing 1.43 N N
5 C3 C4 C C doub 1.38 N Y
6 C4 C5 C C sing 1.4 N Y
7 C5 C6 C C doub 1.4 N Y
8 C5 C7 C C sing 1.48 N N
9 C7 N8 C N sing 1.35 N N
10 C7 O18 C O doub 1.22 N N
11 N8 C9 N C sing 1.47 N N
12 C9 C10 C C sing 1.53 N N
13 C9 C11 C C sing 1.53 N N
14 C10 C11 C C sing 1.53 N N
15 C10 C12 C C sing 1.51 N N
16 C12 C13 C C doub 1.38 N Y
17 C12 C17 C C sing 1.38 N Y
18 C13 C14 C C sing 1.38 N Y
19 C14 C15 C C doub 1.38 N Y
20 C15 C16 C C sing 1.38 N Y
21 C16 C17 C C doub 1.38 N Y
22 C19 N20 C N trip 1.14 N N
23 C1 H1 C H sing 1.08 N N
24 C3 H3 C H sing 1.08 N N
25 C4 H4 C H sing 1.08 N N
26 C6 H6 C H sing 1.08 N N
27 N8 HN8 N H sing 0.97 N N
28 C9 H9 C H sing 1.09 N N
29 C10 H10 C H sing 1.09 N N
30 C11 H11 C H sing 1.09 N N
31 C11 H11A C H sing 1.09 N N
32 C13 H13 C H sing 1.08 N N
33 C14 H14 C H sing 1.08 N N
34 C15 H15 C H sing 1.08 N N
35 C16 H16 C H sing 1.08 N N
36 C17 H17 C H sing 1.08 N N