Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : S38

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -4.02 1.096 -0.508
2 C2 C C2 N Y N 0 -4.943 0.299 0.174
3 C3 C C3 N Y N 0 -4.521 -0.873 0.805
4 C4 C C4 N Y N 0 -3.196 -1.244 0.755
5 C5 C C5 N Y N 0 -2.273 -0.448 0.073
6 C6 C C6 N Y N 0 -2.694 0.725 -0.558
7 C7 C C7 N N N 0 -0.85 -0.846 0.02
8 N8 N N8 N N N 0 0.041 -0.077 -0.638
9 C9 C C9 S N N 0 1.451 -0.472 -0.691
10 C10 C C10 R N N 0 2.486 0.634 -0.902
11 C11 C C11 N N N 0 2.17 -0.344 -2.035
12 C12 C C12 N Y N 0 3.814 0.487 -0.206
13 C13 C C13 N Y N 0 4.231 1.446 0.699
14 C14 C C14 N Y N 0 5.449 1.31 1.338
15 C15 C C15 N Y N 0 6.251 0.216 1.073
16 C16 C C16 N Y N 0 5.834 -0.744 0.169
17 C17 C C17 N Y N 0 4.614 -0.61 -0.467
18 O18 O O18 N N N 0 -0.483 -1.866 0.569
19 C19 C C19 N N N 0 -6.321 0.685 0.226
20 N20 N N20 N N N 0 -7.414 0.991 0.267
21 H1 H H1 N N N 0 -4.346 2.0 -1.0
22 H3 H H3 N N N 0 -5.235 -1.489 1.332
23 H4 H H4 N N N 0 -2.87 -2.15 1.243
24 H6 H H6 N N N 0 -1.981 1.34 -1.085
25 HN8 H HN8 N N N 0 -0.252 0.737 -1.076
26 H9 H H9 N N N 0 1.73 -1.306 -0.047
27 H10 H H10 N N N 0 2.118 1.656 -1.002
28 H11 H H11 N N N 0 2.922 -1.095 -2.276
29 H11A H H11A N N N 0 1.594 0.033 -2.88
30 H13 H H13 N N N 0 3.605 2.301 0.906
31 H14 H H14 N N N 0 5.775 2.06 2.044
32 H15 H H15 N N N 0 7.203 0.11 1.571
33 H16 H H16 N N N 0 6.46 -1.599 -0.038
34 H17 H H17 N N N 0 4.286 -1.362 -1.17